Citation Impact
Citing Papers
Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs
2022 StandoutNobel
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
2017 Standout
Induced Systemic Resistance by Beneficial Microbes
2014 Standout
antiSMASH 6.0: improving cluster detection and comparison capabilities
2021 Standout
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
2015 Standout
Protein oligomer modeling guided by predicted interchain contacts in CASP14
2021 StandoutNobel
Protein tertiary structure prediction and refinement using deep learning and Rosetta in CASP14
2021 StandoutNobel
Zero‐shot mutation effect prediction on protein stability and function using RoseTTAFold
2023 StandoutNobel
Plant biostimulants: Definition, concept, main categories and regulation
2015 Standout
Piezo1 ion channel pore properties are dictated by C-terminal region
2015 StandoutNobel
The gut mycobiome of the Human Microbiome Project healthy cohort
2017 Standout
ColabFold: making protein folding accessible to all
2022 Standout
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
2023 Standout
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
2014
OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs
2016
Assessment and refinement of eukaryotic gene structure prediction with gene-structure-aware multiple protein sequence alignment
2014
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
2015 Standout
A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
2017 Standout
CRISPR-Cas9 Circular Permutants as Programmable Scaffolds for Genome Modification
2019 StandoutNobel
A comprehensive framework for the production of mycelium-based lignocellulosic composites
2020
Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3
2017 StandoutNatureNobel
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
2015 Standout
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
Piezos thrive under pressure: mechanically activated ion channels in health and disease
2017 StandoutNobel
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs
2012
Biofilms: an emergent form of bacterial life
2016 Standout
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
Deep learning enables the atomic structure determination of the Fanconi Anemia core complex from cryoEM
2020 StandoutNobel
Sensitive protein alignments at tree-of-life scale using DIAMOND
2021 Standout
Keystone taxa as drivers of microbiome structure and functioning
2018 Standout
Urinary tract infections: epidemiology, mechanisms of infection and treatment options
2015 Standout
Identification and Analysis of Putative Homologues of Mechanosensitive Channels in Pathogenic Protozoa
2013
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
2017 Standout
Drought increases the frequencies of fungal functional genes related to carbon and nitrogen acquisition
2018
Soil microbiomes and climate change
2019 Standout
Uniclust databases of clustered and deeply annotated protein sequences and alignments
2016
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
2015 Standout
BiG-FAM: the biosynthetic gene cluster families database
2020
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics
2017 Standout
Trichoderma Research in the Genome Era
2013
The Earth BioGenome project: opportunities and challenges for plant genomics and conservation
2019
Toward genome-enabled mycology
2013
Chaperone-Usher Fimbriae of <em>Escherichia coli</em>
2016
Construction and built environment in circular economy: A comprehensive literature review
2021 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides
2018
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
2017 Standout
Microbial evolution in extreme environments: microbial migration, genomic highways, and geochemical barriers in hydrothermal ecosystems
2015
Mycorrhizal ecology and evolution: the past, the present, and the future
2015 Standout
Third generation sequencing: technology and its potential impact on evolutionary biodiversity research
2015
Protein contact prediction using metagenome sequence data and residual neural networks
2019 StandoutNobel
Works of Igor Shabalov being referenced
MycoCosm portal: gearing up for 1000 fungal genomes
2013
The Genome Portal of the Department of Energy Joint Genome Institute
2011
The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
2013