Citation Impact
Citing Papers
Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period
2020 StandoutScience
CD4+ T Cell Depletion during all Stages of HIV Disease Occurs Predominantly in the Gastrointestinal Tract
2004 Standout
Characterization of a canine homolog of hepatitis C virus
2011 StandoutNobel
In Situ Vaccination With a TLR9 Agonist Induces Systemic Lymphoma Regression: A Phase I/II Study
2010
A general and simple method for obtaining R 2 from generalized linear mixed‐effects models
2012 Standout
Immunotherapy of chronic hepatitis C virus infection with antibodies against programmed cell death-1 (PD-1)
2013 StandoutNobel
Inverse Modelling, Sensitivity and Monte Carlo Analysis in R Using Package FME
2010
Slow Human Immunodeficiency Virus Type 1 Evolution in Viral Reservoirs in Infants Treated with Effective Antiretroviral Therapy
2007
Microbial diversity drives multifunctionality in terrestrial ecosystems
2016 Standout
Inference and analysis of cell-cell communication using CellChat
2021 Standout
Less Than 95% Adherence to Nonnucleoside Reverse‐Transcriptase Inhibitor Therapy Can Lead to Viral Suppression
2006
Regulation of microRNA function in animals
2018 Standout
Early Transcriptional Divergence Marks Virus-Specific Primary Human CD8+ T Cells in Chronic versus Acute Infection
2017
HIV-1 reverse transcriptase inhibitor resistance mutations and fitness: A view from the clinic and ex vivo
2008
Multimodel inference in ecology and evolution: challenges and solutions
2011 Standout
Incidence and impact of resistance against approved antiretroviral drugs
2000
Effect of Immunosuppression on T-Helper 2 and B-Cell Responses to Influenza Vaccination
2015 StandoutNobel
Modeling Plasma Virus Concentration during Primary HIV Infection
2000
Longitudinal transcriptomic characterization of the immune response to acute hepatitis C virus infection in patients with spontaneous viral clearance
2018 StandoutNobel
Rapid worldwide depletion of predatory fish communities
2003 StandoutNature
A network-biology perspective of microRNA function and dysfunction in cancer
2016
Predicting species distribution: offering more than simple habitat models
2005 Standout
The Spectrum of Engagement in HIV Care and its Relevance to Test-and-Treat Strategies for Prevention of HIV Infection
2011 Standout
Optimal adaptive testing for epidemic control: Combining molecular and serology tests
2023 StandoutNobel
Hepatitis C Virus Continuously Escapes From Neutralizing Antibody and T-Cell Responses During Chronic Infection In Vivo
2006 StandoutNobel
Universal voluntary HIV testing with immediate antiretroviral therapy as a strategy for elimination of HIV transmission: a mathematical model
2008 Standout
mRNA vaccines for infectious diseases: principles, delivery and clinical translation
2021 StandoutNobel
FunCoup 5: Functional Association Networks in All Domains of Life, Supporting Directed Links and Tissue-Specificity
2021
Targeting multidrug resistance in cancer
2006 Standout
The growing impact of click chemistry on drug discovery
2003 StandoutNobel
Adjusting for partially missing baseline measurements in randomized trials
2004
Resistance to Protease Inhibitors
2001
Leukocyte trafficking to the lungs and beyond: lessons from influenza for COVID-19
2020
Rifamycin‐ResistantMycobacterium tuberculosisin the Highly Active Antiretroviral Therapy Era: A Report of 3 Relapses with Acquired Rifampin Resistance following Alternate‐Day Rifabutin and Boosted Protease Inhibitor Therapy
2009
FORWARD SELECTION OF EXPLANATORY VARIABLES
2008 Standout
The end of AIDS: HIV infection as a chronic disease
2013 Standout
NicheNet: modeling intercellular communication by linking ligands to target genes
2019
T Cell Activation Is Associated with Lower CD4+T Cell Gains in Human Immunodeficiency Virus–Infected Patients with Sustained Viral Suppression during Antiretroviral Therapy
2003
iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data
2018
MODELING SPECIES–HABITAT RELATIONSHIPS WITH SPATIALLY AUTOCORRELATED OBSERVATION DATA
2006
Poor CD4 T cell restoration after suppression of HIV-1 replication may reflect lower thymic function
2001
Cell death and endoplasmic reticulum stress: disease relevance and therapeutic opportunities
2008 Standout
Transcription factor Ikzf1 associates with Foxp3 to repress gene expression in Treg cells and limit autoimmunity and anti-tumor immunity
2024 StandoutNobel
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer
2013 Standout
Outcomes of Dosage Adjustments Used to Manage Antiretroviral Drug Interactions
2007
HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation
2009 Standout
Inhibition of HIV replication: A powerful antiviral strategy by IFN-β gene delivery in CD4+ cells
2007 StandoutNobel
Modelling viral and immune system dynamics
2002
Effective Field Sampling for Predicting the Spatial Distribution of Reindeer (Rangifer tarandus) with Help of the Gibbs Sampler
2003
VARIATION PARTITIONING OF SPECIES DATA MATRICES: ESTIMATION AND COMPARISON OF FRACTIONS
2006 Standout
Antiretroviral Treatment of Adult HIV Infection
2012 Standout
Long-term follow-up studies confirm the stability of the latent reservoir for HIV-1 in resting CD4+ T cells
2003 Standout
Modeling and Simulation of the Immune System as a Self-Regulating Network
2009
Evaluation of antiretrovirals in animal models of HIV infection
2009
Hepatitis C virus kinetics and host responses associated with disease and outcome of infection in chimpanzees
2004 StandoutNobel
Multiple imputation using chained equations: Issues and guidance for practice
2010 Standout
Mathematical modeling of primary hepatitis C infection: Noncytolytic clearance and early blockage of virion production
2005 StandoutNobel
HIV-1 Drug Resistance Profiles in Children and Adults With Viral Load of <50 Copies/mL Receiving Combination Therapy
2001
Proteomics and integrative omic approaches for understanding host–pathogen interactions and infectious diseases
2017
A Spatial Filtering Specification for the Autologistic Model
2004
Reservoirs for HIV-1: Mechanisms for Viral Persistence in the Presence of Antiviral Immune Responses and Antiretroviral Therapy
2000
Low-level viremia persists for at least 7 years in patients on suppressive antiretroviral therapy
2008
Continued Production of Drug-Sensitive Human Immunodeficiency Virus Type 1 in Children on Combination Antiretroviral Therapy Who Have Undetectable Viral Loads
2003
Spatial Data Analysis
2003
Incorporating spatial dependence in predictive vegetation models
2007
Revealing the role of CD4+ T cells in viral immunity
2012
Real-time projections of cholera outbreaks through data assimilation and rainfall forecasting
2016
Collinearity: a review of methods to deal with it and a simulation study evaluating their performance
2012 Standout
Lysosomal activity regulatesCaenorhabditis elegansmitochondrial dynamics through vitamin B12 metabolism
2020 StandoutNobel
State Capacity and Economic Development: A Network Approach
2015 StandoutNobel
DEVELOPING PROBABILISTIC MODELS TO PREDICT AMPHIBIAN SITE OCCUPANCY IN A PATCHY LANDSCAPE
2003
Effects of incorporating spatial autocorrelation into the analysis of species distribution data
2006
Spatial prediction of species distribution: an interface between ecological theory and statistical modelling
2002
Spatial modelling: a comprehensive framework for principal coordinate analysis of neighbour matrices (PCNM)
2006 Standout
Mechanisms of resistance to anticancer drugs: the role of the polymorphic ABC transporters ABCB1 and ABCG2
2005
The Challenge of Viral Reservoirs in HIV-1 Infection
2002
Adjuvant solution for pandemic influenza vaccine production
2012
Maximum entropy modeling of species geographic distributions
2005 Standout
Methods to account for spatial autocorrelation in the analysis of species distributional data: a review
2007 Standout
Smoothing Parameter and Model Selection for General Smooth Models
2016
IL-7 Induces Immunological Improvement in SIV-Infected Rhesus Macaques under Antiviral Therapy
2006 StandoutNobel
Naive T-Cell Depletion Related to Infection by X4 Human Immunodeficiency Virus Type 1 in Poor Immunological Responders to Highly Active Antiretroviral Therapy
2006 StandoutNobel
T Cell Dynamics in HIV-1 Infection
2003
Neutralizing antibody responses drive the evolution of human immunodeficiency virus type 1 envelope during recent HIV infection
2005
Analysis, Estimation, and Validation of Discrete-Time Epidemic Processes
2018
Predicting the spatial distribution of non‐indigenous riparian weeds: issues of spatial scale and extent
2000
Special Anniversary Review: Twenty-five years of human immunodeficiency virus research: successes and challenges
2008
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
2022 Standout
Analyzing spatial autocorrelation in species distributions using Gaussian and logit models
2007
Can the cause of aggregation be inferred from species distributions?
2006
Assessing the validity of autologistic regression
2007
Nonlinear Models for Repeated Measurement Data
1997
Increased Replicative Fitness Can Lead to Decreased Drug Sensitivity of Hepatitis C Virus
2014 StandoutNobel
glmmTMB Balances Speed and Flexibility Among Packages for Zero-inflated Generalized Linear Mixed Modeling
2017 Standout
A statistical explanation of MaxEnt for ecologists
2010 Standout
Changing Face of Vaccination in Immunocompromised Hosts
2014
Measuring Peer Effects on Youth Smoking Behaviour
2007
A Framework for Inferring Fitness Landscapes of Patient-Derived Viruses Using Quasispecies Theory
2014
Information-theoretic approaches to statistical analysis in behavioural ecology: an introduction
2010
Species Distribution Models: Ecological Explanation and Prediction Across Space and Time
2009 Standout
Autologistic Model of Spatial Pattern of Phytophthora Epidemic in Bell Pepper: Effects of Soil Variables on Disease Presence
1997
Aggregation of space-time processes
2003 StandoutNobel
An Improved Model for Spatially Correlated Binary Responses
2000
Nonproliferating Bystander CD4+ T Cells Lacking Activation Markers Support HIV Replication During Immune Activation
2001 StandoutNobel
Autologistic regression model for the distribution of vegetation
2003
Immunogenic Cell Death in Cancer Therapy
2012 Standout
Resistance to Protease Inhibitors
2001
Barrier-Independent, Fitness-Associated Differences in Sofosbuvir Efficacy against Hepatitis C Virus
2016 StandoutNobel
HIV-1 Protease Inhibitors Nelfinavir and Atazanavir Induce Malignant Glioma Death by Triggering Endoplasmic Reticulum Stress
2007
Works of Hulin Wu being referenced
Multiple CD4 + Cell Kinetic Patterns and Their Relationships with Baseline Factors and Virological Responses in HIV Type 1 Patients Receiving Highly Active Antiretroviral Therapy
2001
High-Resolution Temporal Response Patterns to Influenza Vaccine Reveal a Distinct Human Plasma Cell Gene Signature
2013
vFitness: a web-based computing tool for improving estimation of in vitro HIV-1 fitness experiments
2010
Ki-67 expression reveals strong, transient influenza specific CD4 T cell responses after adult vaccination
2012
A note on conditional AIC for linear mixed-effects models
2008
The study of long‐term HIV dynamics using semi‐parametric non‐linear mixed‐effects models
2002
Steady‐state pharmacokinetic interaction of modified‐dose indinavir and rifabutin
2003
Characterization of Viral Dynamics in Human Immunodeficiency Virus Type 1–Infected Patients Treated with Combination Antiretroviral Therapy: Relationships to Host Factors, Cellular Restoration, and Virologic End Points
1999
Modeling Long-Term HIV Dynamics and Antiretroviral Response
2005
Identification of significant host factors for HIV dynamics modelled by non‐linear mixed‐effects models
2002
Relationships between antiviral treatment effects and biphasic viral decay rates in modeling HIV dynamics
1999
RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse
2015
Immune responses to vaccinia and influenza elicited during primary versus recent or distant secondary smallpox vaccination of adults
2006
Population HIV‐1 Dynamics In Vivo: Applicable Models and Inferential Tools for Virological Data from AIDS Clinical Trials
1999
Effect of Zidovudine Resistance Mutations on Virologic Response to Treatment with Zidovudine‐Lamivudine‐Ritonavir: Genotypic Analysis of Human Immunodeficiency Virus Type 1 Isolates from AIDS Clinical Trials Group Protocol 315
2000
Estimation of HIV dynamic parameters
1998
On Identifiability of Nonlinear ODE Models and Applications in Viral Dynamics
2011
Parameter Identifiability and Estimation of HIV/AIDS Dynamic Models
2008
A multiple imputation method for missing covariates in non‐linear mixed‐effects models with application to HIV dynamics
2001
MDR1 Gene Polymorphisms and Phase 1 Viral Decay During HIV-1 Infection
2003
Pharmacokinetics of Nelfinavir and Efavirenz in Antiretroviral-Naive, Human Immunodeficiency Virus-Infected Subjects when Administered Alone or in Combination with Nucleoside Analog Reverse Transcriptase Inhibitors
2005
Quantifying the Early Immune Response and Adaptive Immune Response Kinetics in Mice Infected with Influenza A Virus
2010
Evaluation of a Multiple-Cycle, Recombinant Virus, Growth Competition Assay That Uses Flow Cytometry To Measure Replication Efficiency of Human Immunodeficiency Virus Type 1 in Cell Culture
2006
Dynamics of Human Immunodeficiency Virus Type 1 Replication in Vertically Infected Infants
1999
Modeling and Estimation of Replication Fitness of Human Immunodeficiency Virus Type 1 In Vitro Experiments by Using a Growth Competition Assay
2006
Modelling the distribution of plant species using the autologistic regression model
1997
Missing Time-Dependent Covariates in Human Immunodeficiency Virus Dynamic Models
2002
Markov Chain Monte Carlo for Autologistic Regression Models with Application to the Distribution of Plant Species
1998
Ion-Current-Based Temporal Proteomic Profiling of Influenza-A-Virus-Infected Mouse Lungs Revealed Underlying Mechanisms of Altered Integrity of the Lung Microvascular Barrier
2015
Modeling of Influenza-Specific CD8+ T Cells during the Primary Response Indicates that the Spleen Is a Major Source of Effectors
2011
Inappropriate Model-Fitting Methods May Lead to Significant Underestimates of Viral Decay Rates in HIV Dynamic Studies
1999
Modelling the HIV epidemic: A state-space approach
2000
Simulation and Prediction of the Adaptive Immune Response to Influenza A Virus Infection
2009