Citation Impact
Citing Papers
Precise and Heritable Genome Editing in Evolutionarily Diverse Nematodes Using TALENs and CRISPR/Cas9 to Engineer Insertions and Deletions
2013 StandoutNobel
Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle
2014
Management of Helicobacter pylori infection—the Maastricht IV/ Florence Consensus Report
2012 Standout
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
2008
Respiratory Transformation of Nitrous Oxide (N2O) to Dinitrogen by Bacteria and Archaea
2006
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
Kraken: ultrafast metagenomic sequence classification using exact alignments
2014 Standout
Cytosine methylation regulates oviposition in the pathogenic blood fluke Schistosoma mansoni
2011 Standout
Pleistocene sediment DNA reveals hominin and faunal turnovers at Denisova Cave
2021 StandoutNatureNobel
Genome sequence-based species delimitation with confidence intervals and improved distance functions
2013 Standout
Embracing the unknown: disentangling the complexities of the soil microbiome
2017 Standout
High Local Genetic Diversity and Low Outcrossing Rate in Caenorhabditis elegans Natural Populations
2005
Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits
2007
Composition and function of cytochrome c biogenesis System II
2011
Pyrobayes: an improved base caller for SNP discovery in pyrosequences
2008
Mechanistic approaches to the study of evolution: the functional synthesis
2007
Classification and evolution of type II CRISPR-Cas systems
2014 StandoutNobel
Going back to the roots: the microbial ecology of the rhizosphere
2013 Standout
An African origin for the intimate association between humans and Helicobacter pylori
2007 Nature
Horizontal Gene Transfer from Diverse Bacteria to an Insect Genome Enables a Tripartite Nested Mealybug Symbiosis
2013 Standout
The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism
2008
Phylogeny vs genome reshuffling: horizontal gene transfer
2008
PHASTER: a better, faster version of the PHAST phage search tool
2016 Standout
Structurally Mapping Endogenous Heme in the CcmCDE Membrane Complex for Cytochrome c Biogenesis
2018 StandoutNobel
Metagenomic biomarker discovery and explanation
2011 Standout
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
2019 Standout
Speciation through sensory drive in cichlid fish
2008 StandoutNature
The unprecedented nos gene cluster of Wolinella succinogenes encodes a novel respiratory electron transfer pathway to cytochrome c nitrous oxide reductase
2004
Microbial nitrate respiration – Genes, enzymes and environmental distribution
2011
SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing
2007
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
2012 StandoutNature
Genomic islands in pathogenic and environmental microorganisms
2004
The Impact of the Gut Microbiota on Human Health: An Integrative View
2012 Standout
Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere
2009 Standout
The primary transcriptome of the major human pathogen Helicobacter pylori
2010 StandoutNature
ABySS: A parallel assembler for short read sequence data
2009 Standout
Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: A review
2013 Standout
Next-generation DNA sequencing
2008 Standout
A framework for variation discovery and genotyping using next-generation DNA sequencing data
2011 Standout
Gain and Loss of Multiple Genes During the Evolution of Helicobacter pylori
2005
Coming of age: ten years of next-generation sequencing technologies
2016 Standout
The rhizosphere microbiome and plant health
2012 Standout
Sensitive, specific polymorphism discovery in bacteria using massively parallel sequencing
2008
Whole-genome prokaryotic phylogeny
2004
Next-generation sequencing transforms today's biology
2007
Exploring protein fitness landscapes by directed evolution
2009 StandoutNobel
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
2008 Standout
Computational challenges in the analysis of ancient DNA
2010 StandoutNobel
mRNA-Seq whole-transcriptome analysis of a single cell
2009 Standout
De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
2008
The microbial nitrogen-cycling network
2018 Standout
Sequencing technologies — the next generation
2009 Standout
Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome
2011
The human microbiome: at the interface of health and disease
2012 Standout
Evolution of dnmt-2 and mbd-2-like genes in the free-living nematodes Pristionchus pacificus, Caenorhabditis elegans and Caenorhabditis briggsae
2004
MEGAN analysis of metagenomic data
2007 Standout
Physiological Implications of Hydrogen Sulfide: A Whiff Exploration That Blossomed
2012 Standout
Copper Active Sites in Biology
2014 Standout
Succession of microbial consortia in the developing infant gut microbiome
2010 Standout
Engineering microbial consortia: a new frontier in synthetic biology
2008 StandoutNobel
Design and mathematical modelling of a synthetic symbiotic ecosystem
2008
Microbial diversity in the deep sea and the underexplored “rare biosphere”
2006 Standout
Pathogenesis ofHelicobacter pyloriInfection
2006 Standout
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
2012 Standout
Geographic Differences in Gastric Cancer Incidence Can be Explained by Differences between Helicobacter pylori Strains
2008
Metabolic Interdependence of Obligate Intracellular Bacteria and Their Insect Hosts
2004
Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
2011 Standout
Enzymatic and Genetic Characterization of Carbon and Energy Metabolisms by Deep-Sea Hydrothermal Chemolithoautotrophic Isolates ofEpsilonproteobacteria
2005
The Mononuclear Molybdenum Enzymes
2014 Standout
Genome update: prediction of secreted proteins in 225 bacterial proteomes
2005
The Long-Term Stability of the Human Gut Microbiota
2013 StandoutScience
Application of 'next-generation' sequencing technologies to microbial genetics
2009
A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane
2013 Standout
Bacteroides: the Good, the Bad, and the Nitty-Gritty
2007 Standout
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
2013 Standout
Distinguishing features of δ-proteobacterial genomes
2006
In the News
2009
Antimicrobial Resistance in ESKAPE Pathogens
2020 Standout
The Developmental Timing Regulatorhbl-1Modulates the Dauer Formation Decision inCaenorhabditis elegans
2010 StandoutNobel
DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)
2022 Standout
Works of Heike Keller being referenced
A Predator Unmasked: Life Cycle of Bdellovibrio bacteriovorus from a Genomic Perspective
2004 Science
Who Ate Whom? Adaptive Helicobacter Genomic Changes That Accompanied a Host Jump from Early Humans to Large Felines
2006
Complete genome sequence and analysis of Wolinella succinogenes
2003
A Bacterial Artificial Chromosome-Based Genetic Linkage Map of the Nematode Pristionchus pacificus
2002
Who ate whom? Adaptive Helicobacter genomic changes that accompanied a host jump from early humans to large felines
2005
Comprehensive mutation identification in an evolved bacterial cooperator and its cheating ancestor
2006