Standout Papers

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletio... 2011 2026 2016 2021 9.3k
  1. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions (2013)
    Daehwan Kim, Geo Pertea et al. Genome biology
  2. Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks (2012)
    Cole Trapnell, Adam Roberts et al. Nature Protocols
  3. Near-optimal probabilistic RNA-seq quantification (2016)
    Nicolas Bray, Harold Pimentel et al. Nature Biotechnology
  4. Differential analysis of RNA-seq incorporating quantification uncertainty (2017)
    Harold Pimentel, Nicolas Bray et al. Nature Methods
  5. Identification of novel transcripts in annotated genomes using RNA-Seq (2011)
    Adam Roberts, Harold Pimentel et al. Bioinformatics

Immediate Impact

3 by Nobel laureates 50 from Science/Nature 73 standout
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Citing Papers

Akkermansia muciniphila phospholipid induces homeostatic immune responses
2022 StandoutNature
Pleistocene sediment DNA reveals hominin and faunal turnovers at Denisova Cave
2021 StandoutNatureNobel

Works of Harold Pimentel being referenced

Near-optimal probabilistic RNA-seq quantification
2016 Standout

Author Peers

Author Last Decade Papers Cites
Harold Pimentel 16116 3261 6246 4064 19 25.8k
Selina S. Dwight 22214 3846 3504 3221 19 30.8k
Brian A. Williams 16409 3191 6054 4082 33 24.9k
H. Butler 20524 3644 3309 3188 10 29.1k
Laurie Issel‐Tarver 21223 3994 3357 3199 10 30.0k
Mark Chaisson 19583 4181 4414 4503 30 30.9k
Peter Langfelder 13709 2794 3318 3703 45 23.4k
Davis J. McCarthy 20482 3976 5487 6059 37 34.2k
Felix Schlesinger 18755 4134 3649 4903 10 30.1k
Carrie Davis 20105 3773 3585 5203 22 31.5k
Jörg Drenkow 20274 3728 3687 5383 20 31.9k

All Works

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