Guy Karlebach

Differential expression analysis for sequence count data

SCANPY: large-scale single-cell gene expression data analysis

Determining cell type abundance and expression from bulk tissues with digital cytometry

Advantages and limitations of current network inference methods

Revealing the vectors of cellular identity with single-cell genomics

SCENIC: single-cell regulatory network inference and clustering

The JAK/STAT signaling pathway: from bench to clinic

NF-κB and STAT3 in glioblastoma: therapeutic targets coming of age

Microbial interactions: from networks to models

Wisdom of crowds for robust gene network inference

Navigating the network: signaling cross-talk in hematopoietic cells

Jasmonates: biosynthesis, perception, signal transduction and action in plant stress response, growth and development. An update to the 2007 review in Annals of Botany

Multiscale Systems Analysis of Root Growth and Development: Modeling Beyond the Network and Cellular Scales

Immuno-Navigator, a batch-corrected coexpression database, reveals cell type-specific gene networks in the immune system

Big data in healthcare: management, analysis and future prospects

INFERENCE OF GENE REGULATORY NETWORKS USING BOOLEAN-NETWORK INFERENCE METHODS

Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum

Big Data Analytics in Healthcare

Minimally perturbing a gene regulatory network to avoid a disease phenotype: the glioma network as a test case

Modelling and analysis of gene regulatory networks

Constructing Logical Models of Gene Regulatory Networks by Integrating Transcription Factor–DNA Interactions with Expression Data: An Entropy-Based Approach