Citation Impact

Citing Papers

Recent Molecular Genetic Explorations of Caenorhabditis elegans MicroRNAs
2018 StandoutNobel
ShinyGO: a graphical gene-set enrichment tool for animals and plants
2019 Standout
Plants with double genomes might have had a better chance to survive the Cretaceous–Tertiary extinction event
2009
One thousand plant transcriptomes and the phylogenomics of green plants
2019 StandoutNature
Interactive Tree of Life (iTOL) v6: recent updates to the phylogenetic tree display and annotation tool
2024 Standout
The Ensembl Variant Effect Predictor
2016 Standout
Web-based visual analysis for high-throughput genomics
2013
dbNSFP v4: a comprehensive database of transcript-specific functional predictions and annotations for human nonsynonymous and splice-site SNVs
2020
The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized genomic medicine
2013
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
2016 Standout
M-CAP eliminates a majority of variants of uncertain significance in clinical exomes at high sensitivity
2016
Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees
2016
Variation in NRT1.1B contributes to nitrate-use divergence between rice subspecies
2015 Standout
Variability in the response of the cyanobacterium Nodularia spumigena to nitrogen supplementation
2010
High-throughput functional annotation and data mining with the Blast2GO suite
2008 Standout
HMMER web server: interactive sequence similarity searching
2011 Standout
COSMIC: exploring the world's knowledge of somatic mutations in human cancer
2014 Standout
Cryptic species as a window on diversity and conservation
2006 Standout
Ranking non-synonymous single nucleotide polymorphisms based on disease concepts
2014
PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants
2016 Standout
Gene loss and silencing in Tragopogon miscellus (Asteraceae): comparison of natural and synthetic allotetraploids
2009
Predicting the clinical impact of human mutation with deep neural networks
2018
Neuronal Activity Promotes Glioma Growth through Neuroligin-3 Secretion
2015
Results of targeted next-generation sequencing in children with cystic kidney diseases often change the clinical diagnosis
2020
FAST‐TRACK: Integrating QTL mapping and genome scans towards the characterization of candidate loci under parallel selection in the lake whitefish (Coregonus clupeaformis)
2004 Standout
agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update
2017 Standout
Optogenetics: 10 years of microbial opsins in neuroscience
2015 Standout
A Neanderthal Sodium Channel Increases Pain Sensitivity in Present-Day Humans
2020 StandoutNobel
Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomic Data
2016
The molecular ecologist's guide to expressed sequence tags
2006
Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
2015 Standout
EvolView, an online tool for visualizing, annotating and managing phylogenetic trees
2012
SNP discovery via 454 transcriptome sequencing
2007
A Rechargeable Li-Air Fuel Cell Battery Based on Garnet Solid Electrolytes
2017
The power and promise of population genomics: from genotyping to genome typing
2003
Genomic and expression plasticity of polyploidy
2009
High-performance medicine: the convergence of human and artificial intelligence
2018 Standout
Long non-coding RNAs: new players in cell differentiation and development
2013 Standout
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
2012 Standout
Detecting the number of clusters of individuals using the software structure: a simulation study
2005 Standout
Settling the score: variant prioritization and Mendelian disease
2017
Ancestral polyploidy in seed plants and angiosperms
2011 StandoutNature
IMHOTEP—a composite score integrating popular tools for predicting the functional consequences of non-synonymous sequence variants
2016
GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data
2007
Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
2020 Standout
Functional mapping and annotation of genetic associations with FUMA
2017 Standout
A guide to deep learning in healthcare
2018 Standout
RNA-Seq: a revolutionary tool for transcriptomics
2008 Standout
The Phyre2 web portal for protein modeling, prediction and analysis
2015 Standout
SUPERFAMILY 1.75 including a domain-centric gene ontology method
2010
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update
2016 Standout
Flowering time control: another window to the connection between antisense RNA and chromatin
2012
The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure
2014 Standout
CDH1/E-cadherin and solid tumors. An updated gene-disease association analysis using bioinformatics tools
2015
SuSPect: Enhanced Prediction of Single Amino Acid Variant (SAV) Phenotype Using Network Features
2014
Helminth infections: the great neglected tropical diseases
2008 Standout
Mobile Genetic Elements and Evolution of CRISPR-Cas Systems: All the Way There and Back
2017
Effect of life history on microRNA expression during C. elegans development
2011 StandoutNobel
Long Noncoding RNAs: Cellular Address Codes in Development and Disease
2013 Standout
wDBTF: an integrated database resource for studying wheat transcription factor families
2010
Phytozome: a comparative platform for green plant genomics
2011 Standout
Codon usage patterns in Nematoda: analysis based on over 25 million codons in thirty-two species
2006
The SUPERFAMILY 1.75 database in 2014: a doubling of data
2014
Evaluation of in silico algorithms for use with ACMG/AMP clinical variant interpretation guidelines
2017
Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance
2007
Proteomics and integrative omic approaches for understanding host–pathogen interactions and infectious diseases
2017
CADD: predicting the deleteriousness of variants throughout the human genome
2018 Standout
Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution
2014
Diversity of Aphanizomenon flos-aquae (Cyanobacterium) Populations along a Baltic Sea Salinity Gradient
2002
GENETIC, MORPHOLOGICAL, AND TOXICOLOGICAL VARIATION AMONG GLOBALLY DISTRIBUTED STRAINS OF NODULARIA (CYANOBACTERIA)
1999
Diversity of Toxic and Nontoxic Nodularia Isolates (Cyanobacteria) and Filaments from the Baltic Sea
2001
Direct Evidence for Production of Microcystins by Anabaena Strains from the Baltic Sea
2007
Predicting the functional consequences of cancer-associated amino acid substitutions
2013
Bias in Plant Gene Content Following Different Sorts of Duplication: Tandem, Whole-Genome, Segmental, or by Transposition
2009
Pivoting the Plant Immune System from Dissection to Deployment
2013 StandoutScience
Toxic Nodularia spumigena blooms in the coastal waters of the Gulf of Gdańsk: a ten-year survey
2006
Lysosomal activity regulatesCaenorhabditis elegansmitochondrial dynamics through vitamin B12 metabolism
2020 StandoutNobel
Evolview v3: a webserver for visualization, annotation, and management of phylogenetic trees
2019
Cyanobacterial Taxonomy: Current Problems and Prospects for the Integration of Traditional and Molecular Approaches
2006
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
2021 Standout
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
2014 Standout
Sequencing of plant genomes – a review
2015
Review of electrical energy storage technologies, materials and systems: challenges and prospects for large-scale grid storage
2018 Standout
Benthic cyanobacteria of the genus Nodularia are non-toxic, without gas vacuoles, able to glide and genetically more diverse than planktonic Nodularia
2005
Forest bolsters bird abundance, pest control and coffee yield
2013
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
Heritable transgenesis of Parastrongyloides trichosuri: A nematode parasite of mammals
2006
BASIC: Baltic Sea cyanobacteria. An investigation of the structure and dynamics of water blooms of cyanobacteria in the Baltic Sea—responses to a changing environment
2003
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
2018 Standout
Spatiotemporal changes in the genetic diversity of a bloom-forming Microcystis aeruginosa (cyanobacteria) population
2008
Molecular genetic analyses of species boundaries in the sea
2000
The Evaluation of Tools Used to Predict the Impact of Missense Variants Is Hindered by Two Types of Circularity
2015
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
2019 Standout
Dauer larva quiescence alters the circuitry of microRNA pathways regulating cell fate progression inC. elegans
2012 StandoutNobel
dbNSFP v3.0: A One-Stop Database of Functional Predictions and Annotations for Human Nonsynonymous and Splice-Site SNVs
2015
HMMER web server: 2018 update
2018 Standout
Evolutionary Genetics of Genome Merger and Doubling in Plants
2008
Machine Learning in Genomic Medicine: A Review of Computational Problems and Data Sets
2015
The DisGeNET knowledge platform for disease genomics: 2019 update
2019 Standout
Defaunation in the Anthropocene
2014 StandoutScience
Identification of Wheat Gene Sr35 That Confers Resistance to Ug99 Stem Rust Race Group
2013 Science
The rise of harmful cyanobacteria blooms: The potential roles of eutrophication and climate change
2011 Standout
Using deep mutational scanning to benchmark variant effect predictors and identify disease mutations
2020
dbNSFP v2.0: A Database of Human Non-synonymous SNVs and Their Functional Predictions and Annotations
2013
A comparison of homologous recombination rates in bacteria and archaea
2008
Accurate proteome-wide missense variant effect prediction with AlphaMissense
2023 StandoutScienceNobel
InterProScan 5: genome-scale protein function classification
2014 Standout
Phylogenetic analyses of nitrogen-fixing cyanobacteria from the Baltic Sea reveal sequence anomalies in the phycocyanin operon.
2002

Works of Gary Barker being referenced

CerealsDB 2.0: an integrated resource for plant breeders and scientists
2012
Analysis of wheat SAGE tags reveals evidence for widespread antisense transcription
2008
Natural variation in gene expression in the early development of dauer larvae of Caenorhabditis elegans
2009
Galaxy Integrated Omics: Web-based Standards-Compliant Workflows for Proteomics Informed by Transcriptomics*
2015
Redundancy based detection of sequence polymorphisms in expressed sequence tag data using autoSNP
2003
Taxon‐specific PCR for DNA barcoding arthropod prey in bat faeces
2010
TreeVector: Scalable, Interactive, Phylogenetic Trees for the Web
2010
Analysis of virus genomes from glacial environments reveals novel virus groups with unusual host interactions
2015
Genetic diversity within populations of cyanobacteria assessed by analysis of single filaments
2002
An expressed sequence tag analysis of the life-cycle of the parasitic nematode Strongyloides ratti
2005
Transcriptome Shock after Interspecific Hybridization in Senecio Is Ameliorated by Genome Duplication
2006
SNPServer: a real-time SNP discovery tool
2005
Development of anonymous cDNA microarrays to study changes to theSeneciofloral transcriptome during hybrid speciation
2005
Measuring global gene expression in polyploidy; a cautionary note from allohexaploid wheat
2007
A MOLECULAR AND PHENOTYPIC ANALYSIS OF NODULARIA (CYANOBACTERIA) FROM THE BALTIC SEA
1999
Allele-specific PCR shows that genetic exchange occurs among genetically diverse Nodularia (Cyanobacteria) filaments in the Baltic Sea
2000
Equilibrium Moisture Content of Cotton Plant Components
1996
Markedly different gene expression in wheat grown with organic or inorganic fertilizer
2005
GENETIC VARIATION IN APHANIZOMENON (CYANOBACTERIA) COLONIES FROM THE BALTIC SEA AND NORTH AMERICA
2000
Discovery and development of exome‐based, co‐dominant single nucleotide polymorphism markers in hexaploid wheat (Triticum aestivum L.)
2012
Predicting the Functional, Molecular, and Phenotypic Consequences of Amino Acid Substitutions using Hidden Markov Models
2012
Molecular and morphological characters distinguishing twoPorphyraspecies (Rhodophyta: Bangiophycidae)
1996
GENETIC DIVERSITY WITHIN BALTIC SEA POPULATIONS OF NODULARIA (CYANOBACTERIA)1
1997
Mining for Single Nucleotide Polymorphisms and Insertions/Deletions in Maize Expressed Sequence Tag Data
2003
Changes to gene expression associated with hybrid speciation in plants: further insights from transcriptomic studies inSenecio
2008
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