Citation Impact
Citing Papers
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
2006 Standout
The GeneCards Suite: From Gene Data Mining to Disease Genome Sequence Analyses
2016 Standout
Reactive Oxygen Species in Inflammation and Tissue Injury
2013 Standout
WGCNA: an R package for weighted correlation network analysis
2008 Standout
Identification of SNP and SSR markers in eggplant using RAD tag sequencing
2011
Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data
2009
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
2019 Standout
Microsatellite based genetic diversity and relationships among ten Creole and commercial cattle breeds raised in Brazil
2007
Inference and analysis of cell-cell communication using CellChat
2021 Standout
Phylogenetic reconstruction and the identification of ancient polymorphism in the Bovini tribe (Bovidae, Bovinae)
2009 Standout
Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
2010 Standout
The effects of oxidative stress on female reproduction: a review
2012 Standout
Strategies to recover proteins from ocular tissues for proteomics
2008
The Mtb Proteome Library: A Resource of Assays to Quantify the Complete Proteome of Mycobacterium tuberculosis
2013
Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants
2008
The transcriptomics of sympatric dwarf and normal lake whitefish (Coregonus clupeaformis spp., Salmonidae) divergence as revealed by next-generation sequencing
2010
Controlling feeding behavior by chemical or gene-directed targeting in the brain: what's so spatial about our methods?
2013
Defining the proteolytic landscape during enterovirus infection
2020 StandoutNobel
An extensive library of surrogate peptides for all human proteins
2015
High-throughput functional annotation and data mining with the Blast2GO suite
2008 Standout
agriGO: a GO analysis toolkit for the agricultural community
2010 Standout
Unfolding of population structure in Baltic sheep breeds using microsatellite analysis
2005
A Comparison of Brain Gene Expression Levels in Domesticated and Wild Animals
2012 StandoutNobel
A genome-wide association study of meat and carcass traits in Australian cattle1
2011 Standout
The Proteomics Identifications (PRIDE) database and associated tools: status in 2013
2012 Standout
Guidelines for human gene nomenclature
2020
agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update
2017 Standout
Footprints of selection in the ancestral admixture of a New World Creole cattle breed
2011 Standout
An overview of tissue and whole organ decellularization processes
2011 Standout
Genetic diversity in farm animals – a review
2010 Standout
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
2011 Standout
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
2008 Standout
An autosomal genetic linkage map of the sheep genome.
1995
Marine Invertebrate Cell Cultures: New Millennium Trends
2005
Efficiency of semi‐automated fluorescent multiplex PCRs with 11 microsatellite markers for genetic studies of deer populations
2002
On the Dependency of Cellular Protein Levels on mRNA Abundance
2016 Standout
Insights into the Genetic History of French Cattle from Dense SNP Data on 47 Worldwide Breeds
2010 Standout
PeptidePicker: A scientific workflow with web interface for selecting appropriate peptides for targeted proteomics experiments
2014
Ancestral polyploidy in seed plants and angiosperms
2011 StandoutNature
Differentially expressed genes in hypothalamus in relation to genomic regions under selection in two chicken lines resulting from divergent selection for high or low body weight
2011 StandoutNobel
Transcription Factor NRF2 as a Therapeutic Target for Chronic Diseases: A Systems Medicine Approach
2018 Standout
2016 update of the PRIDE database and its related tools
2015 Standout
High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing
2012
Gallus GBrowse: a unified genomic database for the chicken
2007
Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions
2007 Standout
g:Profiler—a web server for functional interpretation of gene lists (2011 update)
2011
Genome-Scale Identification of SARS-CoV-2 and Pan-coronavirus Host Factor Networks
2020 StandoutNobel
Microsatellite evolution--a reciprocal study of repeat lengths at homologous loci in cattle and sheep
1997
ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap
2015 Standout
Conservation genomics: disequilibrium mapping of domestic cattle chromosomal segments in North American bison populations
2005
GIFtS: annotation landscape analysis with GeneCards
2009
Proteomic Analysis Shows Synthetic Oleanane Triterpenoid Binds to mTOR
2011
Published and Perished? The Influence of the Searched Protein Database on the Long-Term Storage of Proteomics Data
2011
Use and misuse of the gene ontology annotations
2008
Orexin activation counteracts decreases in nonexercise activity thermogenesis (NEAT) caused by high-fat diet
2017 Standout
Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19
2020 Standout
Expression of carnitine palmitoyl-CoA transferase-1B is influenced by a cis-acting eQTL in two chicken lines selected for high and low body weight
2013 StandoutNobel
Genetic identification of wild Asian water buffalo in Nepal
2003
Genetic diversity between Italian, Greek and Egyptian buffalo populations
2001
Stacks: an analysis tool set for population genomics
2013 Standout
The 2021 WHO Classification of Tumors of the Central Nervous System: a summary
2021 Standout
Chemicals from lignin: an interplay of lignocellulose fractionation, depolymerisation, and upgrading
2018 Standout
Rapid and Deep Profiling of Human Induced Pluripotent Stem Cell Proteome by One-shot NanoLC–MS/MS Analysis with Meter-scale Monolithic Silica Columns
2012 StandoutNobel
Cloud Infrastructures forIn SilicoDrug Discovery: Economic and Practical Aspects
2013
Genome sequencing and analysis of the model grass Brachypodium distachyon
2010 StandoutNature
Sponge-Associated Microorganisms: Evolution, Ecology, and Biotechnological Potential
2007 Standout
Catalytic Transformation of Lignin for the Production of Chemicals and Fuels
2015 Standout
Mass spectrum sequential subtraction speeds up searching large peptide MS /MS spectra datasets against large nucleotide databases for proteogenomics
2012
Detecting quantitative trait loci affecting beef tenderness on bovine chromosome 7 near calpastatin and lysyl oxidase
2006
Molecular Docking: Shifting Paradigms in Drug Discovery
2019 Standout
GeneDecks: Paralog Hunting and Gene-Set Distillation with GeneCards Annotation
2009
g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)
2019 Standout
Supramolecular Self-Assembled Chaos: Polyphenolic Lignin’s Barrier to Cost-Effective Lignocellulosic Biofuels
2010
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
2022 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
Blast2GO: A Comprehensive Suite for Functional Analysis in Plant Genomics
2008 Standout
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
2017 Standout
Redefining fine roots improves understanding of below‐ground contributions to terrestrial biosphere processes
2015 Standout
Genetic variation within and relationships among populations of Asian goats (Capra hircus)
2001
Software Tool for Researching Annotations of Proteins: Open-Source Protein Annotation Software with Data Visualization
2009
genenames.org: the HGNC resources in 2011
2010
Single-Step Procedure for the Isolation of Proteins at Near-Native Conditions from Mammalian Tissue for Proteomic Analysis on Antibody Microarrays
2010
Multiple Click-Selective tRNA Synthetases Expand Mammalian Cell-Specific Proteomics
2018 StandoutNobel
Works of Fiona McCarthy being referenced
Prediction of peptides observable by mass spectrometry applied at the experimental set level
2007
Transcriptional and pathway analysis in the hypothalamus of newly hatched chicks during fasting and delayed feeding
2010
AgBase: a functional genomics resource for agriculture
2006
AgBase: supporting functional modeling in agricultural organisms
2010
Gene Ontology annotation quality analysis in model eukaryotes
2008
Characterization of 65 bovine microsatellites
1994
HPIDB 2.0: a curated database for host–pathogen interactions
2016
GOing from functional genomics to biological significance
2007
Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines
2012
The Proteogenomic Mapping Tool
2011
AgBase: a unified resource for functional analysis in agriculture
2006
The chicken gene nomenclature committee report
2009
Analysis of Bovine Viral Diarrhea Viruses-infected monocytes: identification of cytopathic and non-cytopathic biotype differences
2010
Primary cell cultures isolated from Penaeus monodon prawns
1999
Sequential Detergent Extraction Prior to Mass Spectrometry Analysis
2009
Differential Detergent Fractionation for Non-electrophoretic Eukaryote Cell Proteomics
2005