Citation Impact
Citing Papers
Negative feedback in the bone morphogenetic protein 4 (BMP4) synexpression group governs its dynamic signaling range and canalizes development
2011
Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria
2016 Science
Deciphering a global network of functionally associated post‐translational modifications
2012
Critical contribution of 3′ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA
2022 StandoutNobel
Extensive identification and analysis of conserved small ORFs in animals
2015
Proteomic dataset for altered glycoprotein expression upon GALNT3 knockdown in ovarian cancer cells
2016 StandoutNobel
Towards the computational design of protein post-translational regulation
2015
Quantification of mRNA and protein and integration with protein turnover in a bacterium
2011
Evolutionary microbial genomics: insights into bacterial host adaptation
2010
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
2012 Standout
Catalytically Active Cas9 Mediates Transcriptional Interference to Facilitate Bacterial Virulence
2019 StandoutNobel
Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees
2016
Circular RNAs are a large class of animal RNAs with regulatory potency
2013 StandoutNature
Melioidosis
2018 Standout
Gut microbiota functions: metabolism of nutrients and other food components
2017 Standout
Strand-specific deep sequencing of the transcriptome
2010
Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present
2012
Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III inStreptococcus pyogenes
2017 StandoutNobel
The Pseudomonas aeruginosa Transcriptome in Planktonic Cultures and Static Biofilms Using RNA Sequencing
2012
TGFβ signalling in context
2012 Standout
RNA-based recognition and targeting: sowing the seeds of specificity
2017 StandoutNobel
NetworkAnalyst for statistical, visual and network-based meta-analysis of gene expression data
2015
Pfam: the protein families database
2013 Standout
Systems biology of microbial metabolism
2010
The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms
2013 Standout
Isotope-targeted glycoproteomics (IsoTaG): a mass-independent platform for intact N- and O-glycopeptide discovery and analysis
2015 StandoutNobel
Essence of life: essential genes of minimal genomes
2011
Comprehensive proteomics
2010
Comprehensive Protocol to Simultaneously Study Protein Phosphorylation, Acetylation, and N-Linked Sialylated Glycosylation
2015
The Science of Antibiotic Discovery
2020 Standout
Progress in prokaryotic transcriptomics
2011
RNAs: regulators of bacterial virulence
2010
Rapid online buffer exchange for screening of proteins, protein complexes and cell lysates by native mass spectrometry
2020 StandoutNobel
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity
2009
The Perseus computational platform for comprehensive analysis of (prote)omics data
2016 Standout
Environmental factors influencing the development and spread of antibiotic resistance
2017 Standout
The Condition-Dependent Transcriptional Landscape of Burkholderia pseudomallei
2013
On the Dependency of Cellular Protein Levels on mRNA Abundance
2016 Standout
Intrinsically disordered proteins: regulation and disease
2011
The primary transcriptome of the major human pathogen Helicobacter pylori
2010 StandoutNature
Intrinsically disordered proteins in cellular signalling and regulation
2014 Standout
Influence of diet on the gut microbiome and implications for human health
2017 Standout
Next-generation proteomics: towards an integrative view of proteome dynamics
2012
A metabolic labeling approach for glycoproteomic analysis reveals altered glycoprotein expression upon GALNT3 knockdown in ovarian cancer cells
2016 StandoutNobel
RNA sequencing uncovers antisense RNAs and novel small RNAs inStreptococcus pyogenes
2015 StandoutNobel
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry–Based Glycoproteomics
2020 StandoutNobel
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
2012 Standout
Signaling Mechanisms in Pattern-Triggered Immunity (PTI)
2015 Standout
Genomic and functional adaptation in surface ocean planktonic prokaryotes
2010 Nature
Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
2014 Standout
Functional Diversity of AAA+ Protease Complexes in Bacillus subtilis
2017 StandoutNobel
Exploring the diversity of protein modifications: special bacterial phosphorylation systems
2016
A systematic review of Leptospira in water and soil environments
2020 Standout
Integrated analysis of global proteome, phosphoproteome and glycoproteome enables complementary interpretation of disease-related protein networks
2015
The excludon: a new concept in bacterial antisense RNA-mediated gene regulation
2012
Bacterial Small RNA Regulators: Versatile Roles and Rapidly Evolving Variations
2010
Computational analysis of bacterial RNA-Seq data
2013
Citrus Huanglongbing: A Newly Relevant Disease Presents Unprecedented Challenges
2013 Standout
An effort to make sense of antisense transcription in bacteria
2012
Multidrug efflux pumps: structure, function and regulation
2018 Standout
Targeted Therapies for Hepatocellular Carcinoma
2011
Proteomics and integrative omic approaches for understanding host–pathogen interactions and infectious diseases
2017
Glycoproteomics
2022 StandoutNobel
Transcriptomic fingerprinting of P seudomonas putida under alternative physiological regimes
2013
Mobile Genetic Elements Associated with Antimicrobial Resistance
2018 Standout
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
2015 Standout
cis-Antisense RNA, Another Level of Gene Regulation in Bacteria
2011
Genome-wide antisense transcription drives mRNA processing in bacteria
2011
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
2012 Standout
RNase Y-mediated regulation of the streptococcal pyrogenic exotoxin B
2018 StandoutNobel
Lysosomal activity regulatesCaenorhabditis elegansmitochondrial dynamics through vitamin B12 metabolism
2020 StandoutNobel
Protein Analysis by Shotgun/Bottom-up Proteomics
2013
Uncovering major genomic features of essential genes in Bacteria and a methanogenic Archaea
2015
Transcriptome Mapping of pAR060302, a bla CMY-2 -Positive Broad-Host-Range IncA/C Plasmid
2012
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
Self-assembly–based posttranslational protein oscillators
2020 StandoutNobel
MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis
2018 Standout
Machine Learning in Agriculture: A Review
2018 Standout
Quantitative Proteome and Transcriptome Analysis of the Archaeon Thermoplasma acidophilum Cultured under Aerobic and Anaerobic Conditions
2010
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
2019 Standout
Absolute quantification of microbial proteomes at different states by directed mass spectrometry
2011
Functional Metabolic Map of Faecalibacterium prausnitzii, a Beneficial Human Gut Microbe
2014
Transcriptome Sequencing Reveals Wide Expression Reprogramming of Basal and Unknown Genes in Leptospira biflexa Biofilms
2016
EASL Clinical Practice Guidelines: Management of hepatocellular carcinoma
2018 Standout
Bacterial Antisense RNAs: How Many Are There, and What Are They Doing?
2010
The structural and functional signatures of proteins that undergo multiple events of post‐translational modification
2014
The return of metabolism: biochemistry and physiology of the pentose phosphate pathway
2014 Standout
Chemical Glycoproteomics
2016 StandoutNobel
Unprecedented High-Resolution View of Bacterial Operon Architecture Revealed by RNA Sequencing
2014
Works of Eva Yus being referenced
Transcriptome Complexity in a Genome-Reduced Bacterium
2009 Science
Dissecting the energy metabolism in Mycoplasma pneumoniae through genome‐scale metabolic modeling
2013
Defining a minimal cell: essentiality of small ORF s and nc RNA s in a genome‐reduced bacterium
2015
Bacterial transcriptomics: what is beyond the RNA horiz-ome?
2011
Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances
2016
Engineering Signal Transduction Pathways
2010
MyMpn: a database for the systems biology model organism Mycoplasma pneumoniae
2014
Cross‐talk between phosphorylation and lysine acetylation in a genome‐reduced bacterium
2012