Eric W. Brown

Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate

Risk of tuberculosis infection and disease associated with work in health care settings.

Comparison of Molecular Typing Methods for the Differentiation of Salmonella Foodborne Pathogens

Standardization of Pulsed-Field Gel Electrophoresis Protocols for the Subtyping of Escherichia coli O157:H7, Salmonella , and Shigella for PulseNet

Insights from 20 years of bacterial genome sequencing

De novo design of modular and tunable protein biosensors

Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella

A canine distemper virus epidemic in Serengeti lions (Panthera leo)

Catalytically Active Cas9 Mediates Transcriptional Interference to Facilitate Bacterial Virulence

The impacts of climate change in coastal marine systems

A flagellum-specific chaperone facilitates assembly of the core type III export apparatus of the bacterial flagellum

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

Compatibility and entry exclusion of IncA and IncC plasmids revisited: IncA and IncC plasmids are compatible

Plant–microbiome interactions: from community assembly to plant health

Horizontal Gene Transfer from Diverse Bacteria to an Insect Genome Enables a Tripartite Nested Mealybug Symbiosis

Eutrophication science: where do we go from here?

Small change: keeping pace with microevolution

Widespread amphibian extinctions from epidemic disease driven by global warming

Analysis of plant microbe interactions in the era of next generation sequencing technologies

Plasmids Carrying blaCMY -2/4 in Escherichia coli from Poultry, Poultry Meat, and Humans Belong to a Novel IncK Subgroup Designated IncK2

Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

Engineering nanoparticles to silence bacterial communication

Bacterial genome sequencing in clinical microbiology: a pathogen-oriented review

The rise and fall of mutator bacteria

The role of microorganisms in coral health, disease and evolution

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

Tuberculosis in Patients with Human Immunodeficiency Virus Infection

Multiple origins of endosymbiosis within the Enterobacteriaceae (γ-Proteobacteria): convergence of complex phylogenetic approaches

Taxonomic evaluation of the genus Enterobacter based on multilocus sequence analysis (MLSA): Proposal to reclassify E. nimipressuralis and E. amnigenus into Lelliottia gen. nov. as Lelliottia nimipressuralis comb. nov. and Lelliottia amnigena comb. nov., respectively, E. gergoviae and E. pyrinus into Pluralibacter gen. nov. as Pluralibacter gergoviae comb. nov. and Pluralibacter pyrinus comb. nov., respectively, E. cowanii, E. radicincitans, E. oryzae and E. arachidis into Kosakonia gen. nov. as Kosakonia cowanii comb. nov., Kosakonia radicincitans comb. nov., Kosakonia oryzae comb. nov. and Kosakonia arachidis comb. nov., respectively, and E. turicensis, E. helveticus and E. pulveris into Cronobacter as Cronobacter zurichensis nom. nov., Cronobacter helveticus comb. nov. and Cronobacter pulveris comb. nov., respectively, and emended description of the genera Enterobacter and Cronobacter

PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data

Recombination and Population Structure in Salmonella enterica

Understanding the mechanisms and drivers of antimicrobial resistance

Tuberculosis control and elimination 2010–50: cure, care, and social development

Genomic and Functional Characterization of Enterococcus faecalis Isolates Recovered From the International Space Station and Their Potential for Pathogenicity

Prevalence and diversity of IncX plasmids carrying fluoroquinolone and β-lactam resistance genes inEscherichia colioriginating from diverse sources and geographical areas

RNA-guided genetic silencing systems in bacteria and archaea

The A to Z of A/C plasmids

Routine Use of Microbial Whole Genome Sequencing in Diagnostic and Public Health Microbiology

The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome

A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?

Applications of CRISPR technologies in research and beyond

Nanomaterial-based therapeutics for antibiotic-resistant bacterial infections

Coming of age: ten years of next-generation sequencing technologies

Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine

Implant infections: adhesion, biofilm formation and immune evasion

Confronting the coral reef crisis

RefSeq microbial genomes database: new representation and annotation strategy

NCBI prokaryotic genome annotation pipeline

Impacts of climate change on the future of biodiversity

ECOLOGICAL MECHANISMS LINKING PROTECTED AREAS TO SURROUNDING LANDS

Emerging fungal threats to animal, plant and ecosystem health

The international nucleotide sequence database collaboration

Molecular Fingerprinting ofMycobacterium tuberculosis: How Can It Help the Clinician?

The Non-Flagellar Type III Secretion System Evolved from the Bacterial Flagellum and Diversified into Host-Cell Adapted Systems

Unraveling the regulatory network of IncA/C plasmid mobilization: When genomic islands hijack conjugative elements

Detection of pathogens in water: from phylochips to qPCR to pyrosequencing

The Repertoire of ICE in Prokaryotes Underscores the Unity, Diversity, and Ubiquity of Conjugation

Fingerprinting food: current technologies for the detection of food adulteration and contamination

Mobile Genetic Elements Associated with Antimicrobial Resistance

Sexual isolation and speciation in bacteria.

Novel Virulence Gene and Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Multilocus Sequence Typing Scheme for Subtyping of the Major Serovars ofSalmonella entericasubsp.enterica

Water Analysis: Emerging Contaminants and Current Issues

The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes

Coral Reefs Under Rapid Climate Change and Ocean Acidification

Pathogen Genomics in Public Health

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

Prevalence and Risk Factors forMycobacterium bovisInfection in African Lions (Panthera leo) in the Kruger National Park

CRISPR-Cas: biology, mechanisms and relevance

Analyzing a bioterror attack on the food supply: The case of botulinum toxin in milk

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

Emerging Infectious Diseases of Wildlife-- Threats to Biodiversity and Human Health

Global Change and the Ecology of Cities

Rapid Detection of Botulinum Neurotoxins—A Review

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

Climate Change, Human Impacts, and the Resilience of Coral Reefs

Facility-Specific “House” Microbiome Drives Microbial Landscapes of Artisan Cheesemaking Plants

Optical maps distinguish individual strains of Escherichia coli O157 : H7

Genomic insights that advance the species definition for prokaryotes

Climate Warming and Disease Risks for Terrestrial and Marine Biota

Depletion, Degradation, and Recovery Potential of Estuaries and Coastal Seas

Meat consumption, health, and the environment

The rising tide of ocean diseases: unsolved problems and research priorities

A Novel Coronavirus from Patients with Pneumonia in China, 2019

Beneficial traits of bacterial endophytes belonging to the core communities of the tomato root microbiome

Sexual Isolation and Speciation in Bacteria

IoT, Big Data, and Artificial Intelligence in Agriculture and Food Industry

Plasmid Diversity and Adaptation Analyzed by Massive Sequencing of Escherichia coli Plasmids

Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea

JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison

CRISPR‐Based Technologies and the Future of Food Science

The Role of CRISPR-Cas Systems in Virulence of Pathogenic Bacteria

The Soil Microbiome Influences Grapevine-Associated Microbiota

Subtyping Salmonella enterica Serovar Enteritidis Isolates from Different Sources by Using Sequence Typing Based on Virulence Genes and Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs)

Antimicrobial Resistance in ESKAPE Pathogens

In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing

Limited boundaries for extensive horizontal gene transfer among Salmonella pathogens

Baseline survey of the anatomical microbial ecology of an important food plant: Solanum lycopersicum (tomato)

Detection of recombination among Salmonella enterica strains using the incongruence length difference test

Molecular applications for identifying microbial pathogens in the post-9/11 era

Tuberculosis Among Urban Health Care Workers: A Study Using Restriction Fragment Length Polymorphism Typing

Genomic variability among enteric pathogens: the case of the mutS–rpoS intergenic region

High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

Is 16S rDNA a Reliable Phylogenetic Marker to Characterize Relationships Below the Family Level in the Enterobacteriaceae?

Integrating Genome-based Informatics to Modernize Global Disease Monitoring, Information Sharing, and Response

Characterization of microflora in Latin-style cheeses by next-generation sequencing technology

Genomics of foodborne pathogens for microbial food safety

Botulinum Neurotoxin Detection Methods for Public Health Response and Surveillance

Phylogenetics and Differentiation of Salmonella Newport Lineages by Whole Genome Sequencing

PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species

Chips and SNPs, Bugs and Thugs: A Molecular Sleuthing Perspective

Co-Enriching Microflora Associated with Culture Based Methods to Detect Salmonella from Tomato Phyllosphere

Comparative Genomic Analysis and Virulence Differences in Closely Related Salmonella enterica Serotype Heidelberg Isolates from Humans, Retail Meats, and Animals

Draft Genome Sequences of Eight Salmonella enterica Serotype Newport Strains from Diverse Hosts and Locations

A lion lentivirus related to feline immunodeficiency virus: epidemiologic and phylogenetic aspects

Enhanced Subtyping Scheme forSalmonellaEnteritidis

Detection of Live Salmonella sp. Cells in Produce by a TaqMan-Based Quantitative Reverse Transcriptase Real-Time PCR Targeting invA mRNA

Association of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Elements with Specific Serotypes and Virulence Potential of Shiga Toxin-Producing Escherichia coli

Draft Genome Sequences of 21 Salmonella enterica Serovar Enteritidis Strains

Practical Value of Food Pathogen Traceability through Building a Whole-Genome Sequencing Network and Database

T-LYMPHOCYTE PROFILES IN FIV-INFECTED WILD LIONS AND PUMAS REVEAL CD4 DEPLETION

Complete Sequences of Six IncA/C Plasmids of Multidrug-Resistant Salmonella enterica subsp. enterica Serotype Newport

Phylogenetic Evidence for Horizontal Transfer of mutS Alleles among Naturally Occurring Escherichia coli Strains

Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea

Integrating Genome-based Informatics to Modernize Global Disease Monitoring, Information Sharing, and Response

Rapid Whole-Genome Sequencing for Surveillance ofSalmonella entericaSerovar Enteritidis

Phylogenetic evidence for extensive horizontal gene transfer of type III secretion system genes among enterobacterial plant pathogens

Viruses of the Serengeti: patterns of infection and mortality in African lions

Detection of Botulinal Neurotoxins A, B, E, and F by Amplified Enzyme-Linked Immunosorbent Assay: Collaborative Study