Citation Impact
Citing Papers
PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
2019 Standout
NCBI Taxonomy: a comprehensive update on curation, resources and tools
2020 Standout
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
2020 Standout
One thousand plant transcriptomes and the phylogenomics of green plants
2019 StandoutNature
Understanding Command and Control
2006 Standout
The last common ancestor of animals lacked the HIF pathway and respired in low-oxygen environments
2018
Molluscan Shell Proteins: Primary Structure, Origin, and Evolution
2007 Standout
Critical contribution of 3′ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA
2022 StandoutNobel
Pharmacologic Targeting of Hypoxia-Inducible Factors
2019 StandoutNobel
Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences
2019
A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes
2013 Standout
OrthoFinder: phylogenetic orthology inference for comparative genomics
2019 Standout
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
2014 Standout
Striking Oxygen Sensitivity of the Peptidylglycine α-Amidating Monooxygenase (PAM) in Neuroendocrine Cells
2015 StandoutNobel
Acoelomorph flatworms are deuterostomes related to Xenoturbella
2011 Nature
Evolutionary Dynamics of the wnt Gene Family: A Lophotrochozoan Perspective
2010
Identifying localized biases in large datasets: A case study using the avian tree of life
2013
Genomic insights into Wnt signaling in an early diverging metazoan, the ctenophore Mnemiopsis leidyi
2010 Standout
The evolution of engrailed genes after duplication and speciation events
2002
Phylogenomic Analyses of Nuclear Genes Reveal the Evolutionary Relationships within the BEP Clade and the Evidence of Positive Selection in Poaceae
2013
Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences
2010 StandoutNature
Biodiversity loss and its impact on humanity
2012 StandoutNature
Developmental expression of homeobox genes in the ctenophore Mnemiopsis leidyi
2008
ATM and related protein kinases: safeguarding genome integrity
2003 Standout
Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough
2011
The Human Transcription Factors
2018 Standout
PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses
2012 Standout
Impacts of biological invasions: what's what and the way forward
2012 Standout
Antiviral resistance of stem cells
2018 StandoutNobel
MicroRNAs tell an evo–devo story
2009
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
2019 Standout
Delivery technologies for cancer immunotherapy
2019 Standout
Nearly complete rRNA genes assembled from across the metazoan animals: Effects of more taxa, a structure-based alignment, and paired-sites evolutionary models on phylogeny reconstruction
2009
DNA cross-link-dependent RAD50/MRE11/NBS1 subnuclear assembly requires the Fanconi anemia C protein
2002
Contentious relationships in phylogenomic studies can be driven by a handful of genes
2017
An Integrated View of Precambrian Eumetazoan Evolution
2009
ATM Phosphorylates Histone H2AX in Response to DNA Double-strand Breaks
2001 Standout
Metazoan MicroRNAs
2018 Standout
Where's the glass? Biomarkers, molecular clocks, and microRNAs suggest a 200‐Myr missing Precambrian fossil record of siliceous sponge spicules
2009
Ancient connection between NKL genes and the mesoderm? Insights from Tlx expression in a ctenophore
2007
On the Role of DNA Double-Strand Breaks in Toxicity and Carcinogenesis
1997
Structural and functional analysis of coral Hypoxia Inducible Factor
2017
A Phylogenomic Approach to Resolve the Arthropod Tree of Life
2010
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
2015 StandoutNature
Improving animal phylogenies with genomic data
2011
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
2016 Standout
Inferring ancient divergences requires genes with strong phylogenetic signals
2013 Nature
Ctenophore relationships and their placement as the sister group to all other animals
2017
The mismatch DNA repair heterodimer, hMSH2/6, regulates BLM helicase
2004 StandoutNobel
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
2018 Standout
The Dawn of Developmental Signaling in the Metazoa
2009
WNT/β-Catenin Signalling and Epithelial Patterning in the Homoscleromorph Sponge Oscarella
2009
A placozoan affinity for Dickinsonia and the evolution of late Proterozoic metazoan feeding modes
2010
DNA double-strand breaks: signaling, repair and the cancer connection
2001 Standout
Characterization of homologous recombination induced by replication inhibition in mammalian cells
2001
RNA interference in marine and freshwater sponges: actin knockdown in Tethya wilhelma and Ephydatia muelleriby ingested dsRNA expressing bacteria
2011
Coming of age: ten years of next-generation sequencing technologies
2016 Standout
The rise of oxygen in Earth’s early ocean and atmosphere
2014 StandoutNature
The origin and evolution of cell types
2016
Impact of Missing Data on Phylogenies Inferred from Empirical Phylogenomic Data Sets
2012
Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
2008 StandoutNature
The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
2014 Standout
Genesis and Expansion of Metazoan Transcription Factor Gene Classes
2008
Short Chain Fatty Acids (SCFAs)-Mediated Gut Epithelial and Immune Regulation and Its Relevance for Inflammatory Bowel Diseases
2019 Standout
A "Neural" Enzyme in Nonbilaterian Animals and Algae: Preneural Origins for Peptidylglycine -Amidating Monooxygenase
2012
Mining museums for historical DNA: advances and challenges in museomics
2021 Standout
PIWI proteins and PIWI-interacting RNAs in the soma
2014 Nature
Phylogenetic-Signal Dissection of Nuclear Housekeeping Genes Supports the Paraphyly of Sponges and the Monophyly of Eumetazoa
2009
Evolutionary history of Coleoptera revealed by extensive sampling of genes and species
2018 Standout
Inflammageing: chronic inflammation in ageing, cardiovascular disease, and frailty
2018 Standout
Rangeomorphs, Thectardis (Porifera?) and dissolved organic carbon in the Ediacaran oceans
2010
ModelFinder: fast model selection for accurate phylogenetic estimates
2017 Standout
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
Keeping It All Going—Complement Meets Metabolism
2017
Modeling neurodevelopmental disorder-associated humanAGO1mutations inCaenorhabditis elegansArgonautealg-1
2024 StandoutNobel
Assessing the root of bilaterian animals with scalable phylogenomic methods
2009 Standout
Surprisingly complex T‐box gene complement in diploblastic metazoans
2007
Why biodiversity is important to the functioning of real‐world ecosystems
2008
The Multiple Origins of Complex Multicellularity
2011
A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera
2012 Standout
Blue-light-receptive cryptochrome is expressed in a sponge eye lacking neurons and opsin
2012 StandoutNobel
The Cambrian Conundrum: Early Divergence and Later Ecological Success in the Early History of Animals
2011 StandoutScience
How and Why to Build a Unified Tree of Life
2017
Stacks: an analysis tool set for population genomics
2013 Standout
Unringing a bell: metazoan phylogenomics and the partition bootstrap
2009
No longer Demospongiae: Homoscleromorpha formal nomination as a fourth class of Porifera
2011
The genome sequence of the colonial chordate, Botryllus schlosseri
2013
MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda
2011
Conserved Genes, Sampling Error, and Phylogenomic Inference
2013
UFBoot2: Improving the Ultrafast Bootstrap Approximation
2017 Standout
Higher-level metazoan relationships: recent progress and remaining questions
2011
Genome‐wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the L ake V ictoria cichlid adaptive radiation
2012
A molecular phylogeny of historical and contemporary specimens of an under‐studied micro‐invertebrate group
2020
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
2019 Standout
THE IMPORTANCE OF PREADAPTED GENOMES IN THE ORIGIN OF THE ANIMAL BODYPLANS AND THE CAMBRIAN EXPLOSION
2009
Statistical binning enables an accurate coalescent-based estimation of the avian tree
2014 Science
Regulation of mRNA Translation and Stability by microRNAs
2010 Standout
ASTRAL: genome-scale coalescent-based species tree estimation
2014 Standout
Revisiting metazoan phylogeny with genomic sampling of all phyla
2019
Works of Éric Quéinnec being referenced
Phylogenomics Revives Traditional Views on Deep Animal Relationships
2009 Standout
A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals
2017
New tricks with old genes: the genetic bases of novel cnidarian traits
2010
Induction of double-strand breaks in Chinese hamster ovary cells at two different dose rates of γ-irradiation
1995
Barnacle duplicate engrailed genes: divergent expression patterns and evidence for a vestigial abdomen
2000
Heterospecific transgenesis in Drosophila suggests that engrailed.a is regulated by POU proteins in the crustacean Sacculina carcini
2002
Expansion of the SOX gene family predated the emergence of the Bilateria
2006
Insights into the early evolution of SOX genes from expression analyses in a ctenophore
2008
Exploring the potential of small RNA subunit and ITS sequences for resolving phylogenetic relationships within the phylum Ctenophora
2014
Somatic stem cells express Piwi and Vasa genes in an adult ctenophore: Ancient association of “germline genes” with stemness
2010
Challenges for biodiversity research in Europe
2011