Citation Impact
Citing Papers
Developmental Patterning by Mechanical Signals in Arabidopsis
2008 Science
Dual Effects of miR156-Targeted SPL Genes and CYP78A5/KLUH on Plastochron Length and Organ Size in Arabidopsis thaliana
2008
Positional Information and Pattern Formation
2016
A Quantitative Spatiotemporal Atlas of Gene Expression in the Drosophila Blastoderm
2008
Accurate measurements of dynamics and reproducibility in small genetic networks
2013
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
Incorporation of sensing modalities into de novo designed fluorescence-activating proteins
2021 StandoutNobel
The ϕPA3 phage nucleus is enclosed by a self-assembling 2D crystalline lattice
2023 StandoutNobel
LAMMPS - a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales
2021 Standout
Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation
2022
On the computational architecture of the neocortex
1991
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
2002 Standout
'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns
2000
The Blood-Brain Barrier in Health and Chronic Neurodegenerative Disorders
2008 Standout
Forces in Tissue Morphogenesis and Patterning
2013 Standout
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
2003 Standout
Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution
2010
Decoding Neuronal Ensembles in the Human Hippocampus
2009 StandoutNobel
Expression of a single transfected cDNA converts fibroblasts to myoblasts
1987 Standout
Point Set Registration: Coherent Point Drift
2010 Standout
The free-energy principle: a unified brain theory?
2010 Standout
Optimizing the fMRI data-processing pipeline using prediction and reproducibility performance metrics: I. A preliminary group analysis
2004
Glucose transport to the brain: A systems model
2005
Circular analysis in systems neuroscience: the dangers of double dipping
2009 Standout
Clk post-transcriptional control denoises circadian transcription both temporally and spatially
2015 StandoutNobel
Mathematical Model of the Drosophila Circadian Clock: Loop Regulation and Transcriptional Integration
2009
A Fast Learning Algorithm for Deep Belief Nets
2006 StandoutNobel
An overview of fast convergent ordered-subsets reconstruction methods for emission tomography based on the incremental EM algorithm
2006
Measuring mRNA copy number in individual Escherichia coli cells using single-molecule fluorescent in situ hybridization
2013
Hierarchical models of object recognition in cortex
1999 Standout
Membrane Fusion
2003 StandoutNobel
Fiji: an open-source platform for biological-image analysis
2012 Standout
Origin, Biogenesis, and Activity of Plant MicroRNAs
2009 Standout
Eye movements in reading and information processing: 20 years of research.
1998 Standout
Dynamic predictions: Oscillations and synchrony in top–down processing
2001 Standout
IFNβ-dependent increases in STAT1, STAT2, and IRF9 mediate resistance to viruses and DNA damage
2013 StandoutNobel
A Genome-Wide Analysis Indicates that Yeast Pre-mRNA Splicing Is Predominantly Posttranscriptional
2006 StandoutNobel
Linking Splicing to Pol II Transcription Stabilizes Pre-mRNAs and Influences Splicing Patterns
2006
Synthetic cell biology
2001
Predictive coding in the visual cortex: a functional interpretation of some extra-classical receptive-field effects
1999 Standout
Imaging in Systems Biology
2007
Saccadic localization of random dot targets
1998
Learning multiple layers of representation
2007 StandoutNobel
The Database of Interacting Proteins: 2004 update
2003 Standout
Positional information and patterning revisited
2010
Detecting Representations of Recent and Remote Autobiographical Memories in vmPFC and Hippocampus
2012 StandoutNobel
Dynamic control of positional information in the early Drosophila embryo
2004 Nature
The accuracy and precision of saccades to small and large targets
1995
Neural network computation with DNA strand displacement cascades
2011 Nature
A synthetic multicellular system for programmed pattern formation
2005 StandoutNatureNobel
Support vector machines for temporal classification of block design fMRI data
2005
Long Noncoding RNAs: Cellular Address Codes in Development and Disease
2013 Standout
Deep learning in neural networks: An overview
2014 Standout
A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes
2002
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
2002 Standout
Common pattern formation, modularity and phase transitions in a gene network model of morphogenesis
2002
Quantitative semi-automated analysis of morphogenesis with single-cell resolution in complex embryos
2012 StandoutNobel
Molecular analysis of the armadillo locus: uniformly distributed transcripts and a protein with novel internal repeats are associated with a Drosophila segment polarity gene.
1989 StandoutNobel
The molecular genetics of the bithorax complex of Drosophila: characterization of the products of the Abdominal-B domain.
1989 StandoutNobel
GENETIC “CODE ”: Representations and Dynamical Models of Genetic Components and Networks
2002
Coordinating Radiometals of Copper, Gallium, Indium, Yttrium, and Zirconium for PET and SPECT Imaging of Disease
2010 Standout
Computational Science — ICCS 2003
2003
Analysis of gene expression data with pathway scores.
2000
A review of evolutionary artificial neural networks
1993
Dynamical Analysis of Regulatory Interactions in the Gap Gene System of Drosophila melanogaster
2004
Robot hand-eye coordination based on stereo vision
1995
A Hypercube-Based Encoding for Evolving Large-Scale Neural Networks
2009
Non‐invasive, ratiometric determination of intracellular pH in Pseudomonas species using a novel genetically encoded indicator
2019
Complex networks: Structure and dynamics
2006 Standout
Parallel Multistream Training of High-Dimensional Neural Network Potentials
2019
Structural and Functional Brain Networks: From Connections to Cognition
2013 StandoutScience
Materials‐based strategies for multi‐enzyme immobilization and co‐localization: A review
2013
Human-level performance in 3D multiplayer games with population-based reinforcement learning
2019 StandoutScienceNobel
Shape matching and object recognition using shape contexts
2002 Standout
Data visualization by multidimensional scaling: a deterministic annealing approach
2000
Medical image analysis: progress over two decades and the challenges ahead
2000 Standout
View-based object recognition using saliency maps
1999
Distinctive Image Features from Scale-Invariant Keypoints
2004 Standout
Artificial Molecular Machines
2015 Standout
Wound Healing: A Cellular Perspective
2018 Standout
A tutorial on visual servo control
1996 Standout
Mutations in the Drosophila gene extradenticle affect the way specific homeo domain proteins regulate segmental identity.
1990 StandoutNobel
The Complexity of Decentralized Control of Markov Decision Processes
2013
Multimerization of an Alcohol Dehydrogenase by Fusion to a Designed Self-Assembling Protein Results in Enhanced Bioelectrocatalytic Operational Stability
2019 StandoutNobel
Regularization and Variable Selection Via the Elastic Net
2005 Standout
Pattern formation during vulval development in C. elegans
1986 StandoutNobel
Nonlinear Dimensionality Reduction by Locally Linear Embedding
2000 StandoutScience
A Developmental Approach to Structural Self-Organization in Reservoir Computing
2012
A long-range-corrected time-dependent density functional theory
2004 Standout
Rapid identification of slow healing wounds
2015
Works of Eric Mjolsness being referenced
An auxin-driven polarized transport model for phyllotaxis
2006
New Algorithms for 2D and 3D Point Matching: Pose Estimation and Correspondence
1994
From Coexpression to Coregulation: An Approach to Inferring Transcriptional Regulation among Gene Classes from Large-Scale Expression Data
1999
An integrated system for multi-rover scientific exploration
1999
A plausible mechanism for auxin patterning along the developing root
2010
A robust point-matching algorithm for autoradiograph alignment
1997
A ‘random steady-state’ model for the pyruvate dehydrogenase and alpha-ketoglutarate dehydrogenase enzyme complexes
2010
A center-of-mass computation describes the precision of random dot displacement discrimination
1992
Model for cooperative control of positional information in Drosophila by bicoid and maternal hunchback
1995
A Mathematical Model for the Branched Chain Amino Acid Biosynthetic Pathways of Escherichia coli K12
2005
A connectionist model of development
1991
An enzyme mechanism language for the mathematical modeling of metabolic pathways
2004
Measuring single-cell gene expression dynamics in bacteria using fluorescence time-lapse microscopy
2011
Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem
2005
Cellerator: extending a computer algebra system to include biochemical arrows for signal transduction simulations
2003
Scaling, machine learning, and genetic neural nets
1989
New algorithms for 2D and 3D point matching
1998
Machine Learning for Science: State of the Art and Future Prospects
2001 Science
Algebraic transformations of objective functions
1990
A gene network approach to modeling early neurogenesis in Drosophila.
1998
A Lagrangian relaxation network for graph matching
1996
DELTA-NOTCH LATERAL INHIBITORY PATTERNING IN THE EMERGENCE OF CILIATED CELLS IN XENOPUS: EXPERIMENTAL OBSERVATIONS AND A GENE NETWORK MODEL
1999
Online computation of exterior orientation with application to hand-eye calibration
1996
ON COOPERATIVE QUASI-EQUILIBRIUM MODELS OF TRANSCRIPTIONAL REGULATION
2007
Optimization in Model Matching and Perceptual Organization
1989