Citation Impact
Citing Papers
Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads
2016
FLASH: fast length adjustment of short reads to improve genome assemblies
2011 Standout
Navigating the protein fitness landscape with Gaussian processes
2012 StandoutNobel
The biomass distribution on Earth
2018 Standout
RNA 3'-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex
2012
A fast, lock-free approach for efficient parallel counting of occurrences of k -mers
2011 Standout
Cell entry mechanisms of SARS-CoV-2
2020 Standout
Protein structure determination using metagenome sequence data
2017 StandoutScienceNobel
Crippling life support for SARS-CoV-2 and other viruses through synthetic lethality
2020 StandoutNobel
Intestinal Inflammation Targets Cancer-Inducing Activity of the Microbiota
2012 StandoutScience
QUAST: quality assessment tool for genome assemblies
2013 Standout
Reducing Assembly Complexity of Microbial\nGenomes with Single-Molecule Sequencing
2013
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
2012 Standout
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
2017
Rapid and accurate pyrosequencing of angiosperm plastid genomes.
2006
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions
2021 StandoutNobel
Discovery and engineering of enhanced SUMO protease enzymes
2018 StandoutNobel
The Thermotolerant Yeast Kluyveromyces marxianus Is a Useful Organism for Structural and Biochemical Studies of Autophagy
2015 StandoutNobel
Antibiotics in early life alter the murine colonic microbiome and adiposity
2012 Nature
SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor
2020 Standout
Proteorhodopsin Phototrophy Promotes Survival of Marine Bacteria during Starvation
2010
Engineering proteinase K using machine learning and synthetic genes
2007
One chromosome, one contig: complete microbial genomes from long-read sequencing and assembly
2014
SARS and MERS: recent insights into emerging coronaviruses
2016 Standout
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing
2008
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
2015 Standout
Human Genetics Shape the Gut Microbiome
2014 Standout
A decade after SARS: strategies for controlling emerging coronaviruses
2013
GAGE: A critical evaluation of genome assemblies and assembly algorithms
2011
Horizontal Gene Transfer from Diverse Bacteria to an Insect Genome Enables a Tripartite Nested Mealybug Symbiosis
2013 Standout
Short read fragment assembly of bacterial genomes
2007
The Human Intestinal Microbiome in Health and Disease
2016 Standout
Insight into Structure and Assembly of the Nuclear Pore Complex by Utilizing the Genome of a Eukaryotic Thermophile
2011
Coronaviruses Lacking Exoribonuclease Activity Are Susceptible to Lethal Mutagenesis: Evidence for Proofreading and Potential Therapeutics
2013
DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies
2016
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
Insights into RNA synthesis, capping, and proofreading mechanisms of SARS-coronavirus
2014
The MaSuRCA genome assembler
2013
Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii , a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm
2017
Molecular Evolution of Human Coronavirus Genomes
2016
Metagenomic biomarker discovery and explanation
2011 Standout
Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
2015 Standout
Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy
2012 Standout
Coronaviruses
2011
Diet–microbiota interactions as moderators of human metabolism
2016 StandoutNature
The Curious Case of the Nidovirus Exoribonuclease: Its Role in RNA Synthesis and Replication Fidelity
2019
Molecular mechanisms of coronavirus RNA capping and methylation
2016
Coronaviruses: An Overview of Their Replication and Pathogenesis
2015 Standout
The new paradigm of flow cell sequencing: Table 1.
2008
SARS-CoV and emergent coronaviruses: viral determinants of interspecies transmission
2011
CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing
2011
Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation
2017 Standout
From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing
2007 StandoutNobel
The Current and Future State of Vaccines, Antivirals and Gene Therapies Against Emerging Coronaviruses
2020
Experimental and analytical tools for studying the human microbiome
2011
Clinical characteristics and intrauterine vertical transmission potential of COVID-19 infection in nine pregnant women: a retrospective review of medical records
2020 Standout
Hybrid error correction and de novo assembly of single-molecule sequencing reads
2012
Microbiology in the post-genomic era
2008
The development and impact of 454 sequencing
2008
Genome-Scale Identification of SARS-CoV-2 and Pan-coronavirus Host Factor Networks
2020 StandoutNobel
Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer
2017 Standout
SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information
2014
Coronavirus Pathogenesis
2011
Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA
2009 StandoutNobel
RNA-Seq: a revolutionary tool for transcriptomics
2008 Standout
Next-generation sequencing transforms today's biology
2007
Genomic and functional adaptation in surface ocean planktonic prokaryotes
2010 Nature
NCBI prokaryotic genome annotation pipeline
2016 Standout
Accuracy and quality of massively parallel DNA pyrosequencing
2007
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
2013 Standout
Applications of Ultra-high-Throughput Sequencing
2009
SARS-CoV-2 vaccines in development
2020 StandoutNature
Coronavirus Nsp10, a Critical Co-factor for Activation of Multiple Replicative Enzymes
2014
Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19
2020 Standout
Pfam: The protein families database in 2021
2020 Standout
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
2012 Standout
Drug Discovery and Natural Products: End of an Era or an Endless Frontier?
2009 StandoutScience
Structural basis and functional analysis of the SARS coronavirus nsp14–nsp10 complex
2015
Are RNA Viruses Candidate Agents for the Next Global Pandemic? A Review
2017
Genome sequencing and analysis of the model grass Brachypodium distachyon
2010 StandoutNature
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
2014
A Bioinformatician's Guide to Metagenomics
2008
Bambus 2: scaffolding metagenomes
2011
Microbial diversity in the deep sea and the underexplored “rare biosphere”
2006 Standout
Identifying airborne transmission as the dominant route for the spread of COVID-19
2020 StandoutNobel
A family of thermostable fungal cellulases created by structure-guided recombination
2009 StandoutNobel
A Novel Coronavirus from Patients with Pneumonia in China, 2019
2020 Standout
The Long-Term Stability of the Human Gut Microbiota
2013 StandoutScience
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
2013 Standout
Ecology, evolution and classification of bat coronaviruses in the aftermath of SARS
2013
Microbial biodiversity in groundwater ecosystems
2008
LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets
2012
The bacterial pan-genome:a new paradigm in microbiology.
2010
Emerging coronaviruses: Genome structure, replication, and pathogenesis
2020 Standout
Directed evolution of a far-red fluorescent rhodopsin
2014 StandoutNobel
La certeza de lo impredecible: Cultura Educación y Sociedad en tiempos de COVID19
2020 Standout
Structural and molecular basis of mismatch correction and ribavirin excision from coronavirus RNA
2017
Works of Eli Venter being referenced
A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes
2006
Infidelity of SARS-CoV Nsp14-Exonuclease Mutant Virus Replication Is Revealed by Complete Genome Sequencing
2010
ANDES: Statistical tools for the ANalyses of DEep Sequencing
2010
Aggressive assembly of pyrosequencing reads with mates
2008