Citation Impact

Citing Papers

Why highly expressed proteins evolve slowly
2005 StandoutNobel
DNA capture by a CRISPR-Cas9–guided adenine base editor
2020 StandoutScienceNobel
Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes
2012
Caenorhabditis elegans ADAR editing and the ERI-6/7/MOV10 RNAi pathway silence endogenous viral elements and LTR retrotransposons
2020 StandoutNobel
The Widespread Impact of Mammalian MicroRNAs on mRNA Repression and Evolution
2005 Science
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
2012 Standout
Editing of Cellular Self-RNAs by Adenosine Deaminase ADAR1 Suppresses Innate Immune Stress Responses
2016
Motor neurons control blood vessel patterning in the developing spinal cord
2017
Translation of non-standard codon nucleotides reveals minimal requirements for codon-anticodon interactions
2018
A computational screen for site selective A-to-I editing detects novel sites in neuron specific Hu proteins
2010
A scaling normalization method for differential expression analysis of RNA-seq data
2010 Standout
A-to-I editing in human miRNAs is enriched in seed sequence, influenced by sequence contexts and significantly hypoedited in glioblastoma multiforme
2017
Mammalian conserved ADAR targets comprise only a small fragment of the human editosome
2014
Genome-scale DNA methylation maps of pluripotent and differentiated cells
2008 StandoutNature
Regulation of microRNA function in animals
2018 Standout
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
2012 StandoutNature
Modelling and simulating generic RNA-Seq experiments with the flux simulator
2012
Network biology: understanding the cell's functional organization
2004 Standout
Human ADAR1 Prevents Endogenous RNA from Triggering Translational Shutdown
2018 StandoutNobel
High-Resolution Mapping Reveals a Conserved, Widespread, Dynamic mRNA Methylation Program in Yeast Meiosis
2013 StandoutNobel
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
2007 StandoutNobel
From quantum matter to high-temperature superconductivity in copper oxides
2015 StandoutNature
Cracking the epitranscriptome
2016
Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
2012 Standout
microRNA editing in seed region aligns with cellular changes in hypoxic conditions
2016
Systematic characterization of A-to-I RNA editing hotspots in microRNAs across human cancers
2017
Critical Behavior of the Ferromagnetic PerovskiteBaRuO3
2008 StandoutNobel
Recognition of duplex RNA by the deaminase domain of the RNA editing enzyme ADAR2
2015
Inosine cyanoethylation identifies A-to-I RNA editing sites in the human transcriptome
2010
High-Resolution Profiling of Histone Methylations in the Human Genome
2007 Standout
A-to-I RNA Editing Up-regulates Human Dihydrofolate Reductase in Breast Cancer
2017
Altered RNA editing in 3′ UTR perturbs microRNA-mediated regulation of oncogenes and tumor-suppressors
2016
TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins
2016 StandoutNobel
A-to-I editing of coding and non-coding RNAs by ADARs
2015
Differential GC Content between Exons and Introns Establishes Distinct Strategies of Splice-Site Recognition
2012
Network medicine: a network-based approach to human disease
2010 Standout
MicroRNAs: Target Recognition and Regulatory Functions
2009 Standout
The multilayered complexity of ceRNA crosstalk and competition
2014 StandoutNature
Getting connected: analysis and principles of biological networks
2007
The RNA-Editing Enzyme ADAR1 Controls Innate Immune Responses to RNA
2014
The impact of microRNAs on protein output
2008 StandoutNature
Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
2008 StandoutNature
The landscape of long noncoding RNAs in the human transcriptome
2015 Standout
Base editing: precision chemistry on the genome and transcriptome of living cells
2018
Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq
2011
Alternative polyadenylation variants of the RNA binding protein, HuR: abundance, role of AU-rich elements and auto-Regulation
2009
Overlapping transcripts, double-stranded RNA and antisense regulation: A genomic perspective
2006
Altered expression and editing of miRNA-100 regulates iTreg differentiation
2015
Intrinsic Immunity Shapes Viral Resistance of Stem Cells
2017 StandoutNobel
An efficient and sensitive method for preparing cDNA libraries from scarce biological samples
2014 StandoutNobel
Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons
2012 Standout
Accurate identification of A-to-I RNA editing in human by transcriptome sequencing
2011
A genome-wide map of hyper-edited RNA reveals numerous new sites
2014
Search-and-replace genome editing without double-strand breaks or donor DNA
2019 StandoutNature
Age-related gene-specific changes of A-to-I mRNA editing in the human brain
2010
Transcriptome-wide sequencing reveals numerous APOBEC1 mRNA-editing targets in transcript 3′ UTRs
2011
HISAT: a fast spliced aligner with low memory requirements
2015 Standout
limma powers differential expression analyses for RNA-sequencing and microarray studies
2015 Standout
Protein protein interactions, evolutionary rate, abundance and age
2006
The small RNA repertoire of Dictyostelium discoideum and its regulation by components of the RNAi pathway
2007 StandoutNobel
The biogenesis, biology and characterization of circular RNAs
2019 Standout
ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain
2014
RADAR: a rigorously annotated database of A-to-I RNA editing
2013
N6-methyladenosine-dependent regulation of messenger RNA stability
2013 StandoutNature
Principles Governing A-to-I RNA Editing in the Breast Cancer Transcriptome
2015
IsomiRs – the overlooked repertoire in the dynamic microRNAome
2012
The Hallmarks of Aging
2013 Standout
Phases of the InfiniteUHubbard Model on Square Lattices
2012
Editor meets silencer: crosstalk between RNA editing and RNA interference
2006
Catastrophic cascade of failures in interdependent networks
2010 StandoutNature
Refined sgRNA efficacy prediction improves large- and small-scale CRISPR–Cas9 applications
2017 StandoutNobel
N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions
2015 StandoutNature
Alternative splicing and evolution: diversification, exon definition and function
2010
Hepatitis C Virus RNA Functionally Sequesters miR-122
2015 StandoutNobel
HIF-1α is required for development of the sympathetic nervous system
2019 StandoutNobel
Functions and Regulation of RNA Editing by ADAR Deaminases
2010
Global topological features of cancer proteins in the human interactome
2006
CRISPR–Cas13 Precision Transcriptome Engineering in Cancer
2018
Scale-free networks in cell biology
2005
Gene Expression Intensity Shapes Evolutionary Rates of the Proteins Encoded by the Vertebrate Genome
2004
Classification and Regression Trees.
1984 Standout
Circular RNAs: analysis, expression and potential functions
2016
Frequency and fate of microRNA editing in human brain
2008
Reconstructing the DNA Methylation Maps of the Neandertal and the Denisovan
2014 StandoutScienceNobel
Geometrical and Statistical Properties of Systems of Linear Inequalities with Applications in Pattern Recognition
1965
Complex networks: Structure and dynamics
2006 Standout
Analysis and minimization of cellular RNA editing by DNA adenine base editors
2019
RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1
2010
Structural bias in T4 RNA ligase-mediated 3′-adapter ligation
2012
A New Perovskite Polytype in the High-Pressure Sequence of BaIrO3
2009 StandoutNobel
Lattice effects on ferromagnetism in perovskite ruthenates
2013 StandoutNobel
RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself
2015 Science
RNA Scanning of a Molecular Machine with a Built-in Ruler
2016 StandoutNobel
Gene sequence signatures revealed by mining the UniGene affiliation network
2005
A systematic dissection of determinants and consequences of snoRNA-guided pseudouridylation of human mRNA
2022 StandoutNobel
High-pressure synthesis of the cubic perovskite BaRuO 3 and evolution of ferromagnetism in ARuO 3 (A = Ca, Sr, Ba) ruthenates
2008 StandoutNobel
Functional requirements of AID’s higher order structures and their interaction with RNA-binding proteins
2016 StandoutNobel
Growth mechanisms of the AS-level Internet network
2004
Detecting RNA modifications in the epitranscriptome: predict and validate
2017
Extracellular microRNAs in human circulation are associated with miRISC complexes that are accessible to anti-AGO2 antibody and can bind target mimic oligonucleotides
2020 StandoutNobel

Works of Eli Eisenberg being referenced

Modulation of microRNA editing, expression and processing by ADAR2 deaminase in glioblastoma
2015
Evidence for abundant transcription of non-coding regions in the Saccharomyces cerevisiae genome
2005
A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes
2013
Barcoding bias in high-throughput multiplex sequencing of miRNA
2011
Widespread cleavage of A-to-I hyperediting substrates
2009
Trade-off between Transcriptome Plasticity and Genome Evolution in Cephalopods
2017
Is there any sense in antisense editing?
2005
Human housekeeping genes, revisited
2013
Preferential Attachment in the Protein Network Evolution
2003
Large-scale analysis of structural, sequence and thermodynamic characteristics of A-to-I RNA editing sites in human Alu repeats
2010
A-to-I RNA editing — immune protector and transcriptome diversifier
2018
RNA editing level in the mouse is determined by the genomic repeat repertoire
2006
Evidence for large diversity in the human transcriptome created by Alu RNA editing
2009
Identification of RNA editing sites in the SNP database
2005
Consistent levels of A-to-I RNA editing across individuals in coding sequences and non-conserved Alu repeats
2010
Altered adenosine-to-inosine RNA editing in human cancer
2007
Identifying RNA Editing Sites in miRNAs by Deep Sequencing
2013
Systematic identification of edited microRNAs in the human brain
2012
RNA-editing-mediated exon evolution
2007
Genome-wide analysis of Alu editability
2014
Human housekeeping genes are compact
2003
Elevated RNA Editing Activity Is a Major Contributor to Transcriptomic Diversity in Tumors
2015
Sequence based identification of RNA editing sites
2010
Breakdown of the Nagaoka phase in the two-dimensionaltJmodel
2002
Disorder induced ferromagnetism
1999
Is abundant A-to-I RNA editing primate-specific?
2004
Iterative synthesis of threshold functions
1965
The majority of transcripts in the squid nervous system are extensively recoded by A-to-I RNA editing
2015
DREAM: a webserver for the identification of editing sites in mature miRNAs using deep sequencing data
2015
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