Citation Impact
Citing Papers
Histone demethylase KDM6A directly senses oxygen to control chromatin and cell fate
2019 StandoutScienceNobel
Human cerebral organoids recapitulate gene expression programs of fetal neocortex development
2015 StandoutNobel
fastp: an ultra-fast all-in-one FASTQ preprocessor
2018 Standout
Critical contribution of 3′ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA
2022 StandoutNobel
An integrated map of genetic variation from 1,092 human genomes
2012 StandoutNature
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
2014 Standout
Circular RNAs are a large class of animal RNAs with regulatory potency
2013 StandoutNature
A scoutRNA Is Required for Some Type V CRISPR-Cas Systems
2020 StandoutNobel
Dicer-TRBP Complex Formation Ensures Accurate Mammalian MicroRNA Biogenesis
2014 StandoutNobel
Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex
2014 StandoutNature
Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype
2019 Standout
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
A new coronavirus associated with human respiratory disease in China
2020 StandoutNature
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
2014 Standout
Candidate Phyla Radiation Roizmanbacteria From Hot Springs Have Novel and Unexpectedly Abundant CRISPR-Cas Systems
2019 StandoutNobel
Massive mining of publicly available RNA-seq data from human and mouse
2018
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
2014 StandoutNobel
Salmon provides fast and bias-aware quantification of transcript expression
2017 Standout
Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
2015 Standout
Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
2016 Standout
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
2016 Standout
Widespread Translational Remodeling during Human Neuronal Differentiation
2017 StandoutNobel
The pangenome of an agronomically important crop plant Brassica oleracea
2016 Standout
Diet rapidly and reproducibly alters the human gut microbiome
2013 StandoutNature
Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
2019 Standout
HISAT: a fast spliced aligner with low memory requirements
2015 Standout
Argonaute CLIP Defines a Deregulated miR-122-Bound Transcriptome that Correlates with Patient Survival in Human Liver Cancer
2017 StandoutNobel
MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
2016
Distinct Foxp3 enhancer elements coordinate development, maintenance, and function of regulatory T cells
2021 StandoutNobel
Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis
2017 Standout
A thermostable Cas9 with increased lifetime in human plasma
2017 StandoutNobel
Fast gapped-read alignment with Bowtie 2
2012 Standout
Transcription factor Ikzf1 associates with Foxp3 to repress gene expression in Treg cells and limit autoimmunity and anti-tumor immunity
2024 StandoutNobel
Structure and Activity of the RNA-Targeting Type III-B CRISPR-Cas Complex of Thermus thermophilus
2013 StandoutNobel
metaSPAdes: a new versatile metagenomic assembler
2017 Standout
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
2017 Standout
Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection
2016 StandoutNatureNobel
NOVOPlasty: de novo assembly of organelle genomes from whole genome data
2016 Standout
Small RNAs are modified with N-glycans and displayed on the surface of living cells
2021 StandoutNobel
Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19
2020 Standout
Minimap2: pairwise alignment for nucleotide sequences
2018 Standout
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
2013 Standout
Efficient construction of an assembly string graph using the FM-index
2010
CRISPRdirect: software for designing CRISPR/Cas guide RNA with reduced off-target sites
2014 Standout
LAMSA: fast split read alignment with long approximate matches
2016
Exceptional Evolutionary Divergence of Human Muscle and Brain Metabolomes Parallels Human Cognitive and Physical Uniqueness
2014 StandoutNobel
The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote
2013 Standout
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes
2018 StandoutScienceNobel
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
2015 Standout
3D imaging of Sox2 enhancer clusters in embryonic stem cells
2014 StandoutNobel
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
2013 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
Tunable protein synthesis by transcript isoforms in human cells
2016 StandoutNobel
Trimmomatic: a flexible trimmer for Illumina sequence data
2014 Standout
Works of Edward Wu being referenced
SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner
2013
High Throughput Short Read Alignment via Bi-directional BWT
2009
SOAP3: ultra-fast GPU-based parallel alignment tool for short reads
2012
Correction: SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner
2013