Citation Impact

Citing Papers

Recent Molecular Genetic Explorations of Caenorhabditis elegans MicroRNAs
2018 StandoutNobel
RNA-Guided Human Genome Engineering via Cas9
2013 StandoutScience
Systematic analysis of dynamic miRNA-target interactions during C. elegans development
2009 StandoutNobel
Automated de novo prediction of native-like RNA tertiary structures
2007 StandoutNobel
The Cambridge Structural Database
2016 Standout
Alu elements shape the primate transcriptome by cis-regulation of RNA editing
2014
Controlling CRISPR-Cas9 with ligand-activated and ligand-deactivated sgRNAs
2019 StandoutNobel
Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries
2021 Standout
Bridging the gap in RNA structure prediction
2007
mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein–enriched transcripts
2008 StandoutNobel
Disease-Associated Mutations That Alter the RNA Structural Ensemble
2010
The group II intron ribonucleoprotein precursor is a large, loosely packed structure
2010 StandoutNobel
A microRNA family exerts maternal control on sex determination in C. elegans
2017 StandoutNobel
Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System
2015 Standout
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
2020 Standout
A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity
2008 StandoutNobel
SeqFold: Genome-scale reconstruction of RNA secondary structure integrating high-throughput sequencing data
2012
Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III inStreptococcus pyogenes
2017 StandoutNobel
Protocols for the In Silico Design of RNA Nanostructures
2008
Uncertainty in homology inferences: Assessing and improving genomic sequence alignment
2007
The MEME Suite
2015 Standout
An RNA-seq based comparative approach reveals the transcriptome-wide interplay between 3′-to-5′ exoRNases and RNase Y
2020 StandoutNobel
ViennaRNA Package 2.0
2011 Standout
ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules
2016 Standout
Potent effect of target structure on microRNA function
2007 StandoutNobel
TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins
2016 StandoutNobel
MicroRNAs: Target Recognition and Regulatory Functions
2009 Standout
The Vienna RNA Websuite
2008 Standout
The impact of microRNAs on protein output
2008 StandoutNature
miRBase: tools for microRNA genomics
2007 Standout
Atomic accuracy in predicting and designing noncanonical RNA structure
2010 StandoutNobel
The Nucleic Acid Database: new features and capabilities
2013
Colorectal cancer
2019 Standout
The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA
2016 StandoutNatureNobel
Dynamical features of thePlasmodium falciparumribosome during translation
2015 StandoutNobel
Metazoan MicroRNAs
2018 Standout
Alcohol consumption and site-specific cancer risk: a comprehensive dose–response meta-analysis
2014
RNAstructure: software for RNA secondary structure prediction and analysis
2010
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
2010 Standout
Insights into RNA structure and function from genome-wide studies
2014 StandoutNobel
Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed
2015 Standout
The role of site accessibility in microRNA target recognition
2007 Standout
MicroRNA Targeting Specificity in Mammals: Determinants beyond Seed Pairing
2007 Standout
The microRNA.org resource: targets and expression
2007 Standout
MBNL1 binds GC motifs embedded in pyrimidines to regulate alternative splicing
2010
Nascent-Seq Indicates Widespread Cotranscriptional RNA Editing in Drosophila
2012 StandoutNobel
The Gibbs Centroid Sampler
2007
circRNA Biogenesis Competes with Pre-mRNA Splicing
2014 Standout
Gut microbiota in human metabolic health and disease
2020 Standout
N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions
2015 StandoutNature
Serology-Enabled Discovery of Genetically Diverse Hepaciviruses in a New Host
2012 StandoutNobel
Outdoor air pollution and cancer: An overview of the current evidence and public health recommendations
2020
Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
2015 StandoutNobel
Multiplexed RNA structure characterization with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
2011 StandoutNobel
Predicting effective microRNA target sites in mammalian mRNAs
2015 Standout
Complementary Sequence-Mediated Exon Circularization
2014 Standout
Amelioration of metabolic syndrome by metformin associates with reduced indices of low-grade inflammation independently of the gut microbiota
2019
Modeling and design by hierarchical natural moves
2012 StandoutNobel
Macromolecular Modeling with Rosetta
2008 StandoutNobel
Chondrocyte-Specific MicroRNA-140 Regulates Endochondral Bone Development and Targets Dnpep To Modulate Bone Morphogenetic Protein Signaling
2011
Regulated RNA Editing and Functional Epistasis inShakerPotassium Channels
2008
Identification of a Pegivirus (GB Virus-Like Virus) That Infects Horses
2013 StandoutNobel
Identifying complete RNA structural ensembles including pseudoknots
2012
Immunopurification of Ago1 miRNPs selects for a distinct class of microRNA targets
2009 StandoutNobel
Caenorhabditis elegans microRNAs of the let-7 family act in innate immune response circuits and confer robust developmental timing against pathogen stress
2015 StandoutNobel
Robust Distal Tip Cell Pathfinding in the Face of Temperature Stress Is Ensured by Two Conserved microRNAS inCaenorhabditis elegans
2015 StandoutNobel

Works of Ding Ye being referenced

Alu Methylation and Risk of Cancer: A Meta-analysis
2020
Alcohol drinking and the risk of colorectal cancer death
2014
RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble
2005
Activation of AMP‐activated protein kinase by metformin ablates angiotensin II‐induced endoplasmic reticulum stress and hypertension in micein vivo
2017
Rankless by CCL
2026