Citation Impact
Citing Papers
PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
2019 Standout
MEGA11: Molecular Evolutionary Genetics Analysis Version 11
2021 Standout
Cell entry mechanisms of SARS-CoV-2
2020 Standout
Characterization of a canine homolog of hepatitis C virus
2011 StandoutNobel
Didymochlaenaceae: A new fern family of eupolypods I (Polypodiales)
2015
The inclusion of Acrophorus, Diacalpe, Nothoperanema, and Peranema in Dryopteris: The molecular phylogeny, systematics, and nomenclature of Dryopteris subg. Nothoperanema (Dryopteridaceae)
2012
Single-copy nuclear genes resolve the phylogeny of the holometabolous insects
2009
A large‐scale phylogeny of the lycophyte genusSelaginella(Selaginellaceae: Lycopodiopsida) based on plastid and nuclear loci
2015
Visualizing differences in phylogenetic information content of alignments and distinction of three classes of long-branch effects
2007
Molecular circumscription and major evolutionary lineages of the fern genus Dryopteris (Dryopteridaceae)
2012
A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes
2013 Standout
A global plastid phylogeny of the brake fern genus Pteris (Pteridaceae) and related genera in the Pteridoideae
2014
COVID-19 infection: Emergence, transmission, and characteristics of human coronaviruses
2020 Standout
Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary
2008 StandoutNobel
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
2011 Standout
A new test of phylogenetic model fitness addresses the issue of the basal angiosperm phylogeny
2006
Vicariant Origin of Malagasy Reptiles Supports Late Cretaceous Antarctic Land Bridge
2006
Molecular evidence for a novel encapsulated genotype of Trichinella from Patagonia, Argentina
2008
The evolution of supertrees
2004
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
2013 Standout
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
2010 Standout
A review of long‐branch attraction
2005
Summarizing the Evidence on the International Trade in Illegal Wildlife
2010
PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses
2012 Standout
ProtTest: selection of best-fit models of protein evolution
2005 Standout
Inferring genomic flux in bacteria
2008
Should we be worried about long-branch attraction in real data sets? Investigations using metazoan 18S rDNA
2004
A combined evidence phylogenetic analysis of Anguimorpha (Reptilia: Squamata)
2010
Should phylogenetic models be trying to ‘fit an elephant’?
2005
Corneal nerves: structure, contents and function
2003 Standout
Colletotrichum gloeosporioidess.l. associated withTheobroma cacaoand other plants in Panamá: multilocus phylogenies distinguish host-associated pathogens from asymptomatic endophytes
2010 Standout
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
2010 Standout
SARS-CoV and emergent coronaviruses: viral determinants of interspecies transmission
2011
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
2018 Standout
The oldest North American pachycephalosaurid and the hidden diversity of small-bodied ornithischian dinosaurs
2013
Phylogenetic analysis at deep timescales: Unreliable gene trees, bypassed hidden support, and the coalescence/concatalescence conundrum
2014
Recent Trends in Molecular Phylogenetic Analysis: Where to Next?
2010
Application of Phylogenetic Networks in Evolutionary Studies
2005 Standout
Relaxed Phylogenetics and Dating with Confidence
2006 Standout
Navjot's nightmare revisited: logging, agriculture, and biodiversity in Southeast Asia
2013 Standout
Revisiting the Insect Mitochondrial Molecular Clock: The Mid-Aegean Trench Calibration
2010 Standout
Hide and vanish: Data sets where the most parsimonious tree is known but hard to find, and their implications for tree search methods
2014
Phylogenetic relationships among superfamilies of Hymenoptera
2011
An Improved General Amino Acid Replacement Matrix
2008 Standout
Beyond fossil calibrations: realities of molecular clock practices in evolutionary biology
2014
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information
2010 Standout
Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
2007 Standout
Does Choice in Model Selection Affect Maximum Likelihood Analysis?
2008
THE AMPHIBIAN TREE OF LIFE
2006 Standout
Epidemiology, Diagnosis, Treatment, and Control of Trichinellosis
2009 Standout
A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera
2012 Standout
raxmlGUI: a graphical front-end for RAxML
2011 Standout
Cholinergic stimulation of phosphatidic acid formation by rat cornea in vitro.
1986
Thermometers and Barometers for Volcanic Systems
2008 Standout
Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity
2010 StandoutScience
Extended implied weighting
2013
Molecular phylogenetics, morphological cladistics, and fossil record
2010
Fossils, Molecules, Divergence Times, and the Origin of Lissamphibians
2007
Software Review
2005
SYSTEMATIC REVIEW OF THE FROG FAMILY HYLIDAE, WITH SPECIAL REFERENCE TO HYLINAE: PHYLOGENETIC ANALYSIS AND TAXONOMIC REVISION
2005 Standout
Model Selection in Phylogenetics
2005
Hawaiian mantle xenoliths and magmas: Composition and thermal character of the lithosphere
2005
Parsimony, Phylogeny, and Genomics
2006
Computational Molecular Evolution
2006 Standout
Model Selection and Model Averaging in Phylogenetics: Advantages of Akaike Information Criterion and Bayesian Approaches Over Likelihood Ratio Tests
2004 Standout
Estimating Species Phylogeny from Gene-Tree Probabilities Despite Incomplete Lineage Sorting: An Example from Melanoplus Grasshoppers
2007 Standout
Are we in the midst of the sixth mass extinction? A view from the world of amphibians
2008 Standout
A Rapid Bootstrap Algorithm for the RAxML Web Servers
2008 Standout
Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases
2008
A new time tree reveals Earth history’s imprint on the evolution of modern birds
2015
Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion
2007
Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny
2013 Standout
Phylogeny of the Coleoptera Based on Morphological Characters of Adults and Larvae
2011 Standout
ProtTest 3: fast selection of best-fit models of protein evolution
2011 Standout
Testing Methods: The Evaluation of Discovery Operations in Evolutionary Biology
2002
Tracing the Decay of the Historical Signal in Biological Sequence Data
2004
A Phylogenomic Study of Birds Reveals Their Evolutionary History
2008 StandoutScience
2016 Standout
Review of: T.N.T.—Tree Analysis Using New Technology. Version 1.0, by P. Goloboff, J. S. Farris and K. Nixon. Available from the authors and from http://www.zmuc.dk/public/phylogeny
2004
Phylogeny in cryptic weevils: molecules, morphology and new genera of western Palaearctic Cryptorhynchinae (Coleoptera : Curculionidae)
2008 Standout
Phylogeny and classification of the tribe Hydaticini (Coleoptera: Dytiscidae): partition choice for Bayesian analysis with multiple nuclear and mitochondrial protein‐coding genes
2009
Correction: Corrigendum: The oldest North American pachycephalosaurid and the hidden diversity of small-bodied ornithischian dinosaurs
2014 Standout
phytools: an R package for phylogenetic comparative biology (and other things)
2011 Standout
TNT, a free program for phylogenetic analysis
2008 Standout
A community‐derived classification for extant lycophytes and ferns
2016 Standout
Works of Diego Pol being referenced
Measures of stratigraphic fit to phylogeny and their sensitivity to tree size, tree shape, and scale
2004
A Middle Jurassic heterodontosaurid dinosaur from Patagonia and the evolution of heterodontosaurids
2011
Evolution of genomes, host shifts and the geographic spread of SARS‐CoV and related coronaviruses
2008
A pug-nosed crocodyliform from the Late Cretaceous of Madagascar
2000 Nature
Incorporating phylogenetic uncertainty on phylogeny‐based palaeontological dating and the timing of turtle diversification
2012
Biases in Maximum Likelihood and Parsimony: A Simulation Approach to a 10‐Taxon Case
2001
Semi‐strict supertrees
2002
Major Radiations in the Evolution of Caviid Rodents: Reconciling Fossils, Ghost Lineages, and Relaxed Molecular Clocks
2012
A Basal Dromaeosaurid and Size Evolution Preceding Avian Flight
2007 Science
Biases in Maximum Likelihood and Parsimony: A Simulation Approach to a 10-Taxon Case
2001
On Divide-and-Conquer Strategies for Parsimony Analysis of Large Data Sets: Rec-I-DCM3 versus TNT
2007
Splendid and Seldom Isolated: The Paleobiogeography of Patagonia
2013
Semi-strict supertrees
2002
Empirical Problems of the Hierarchical Likelihood Ratio Test for Model Selection
2004