Citation Impact

Citing Papers

High-throughput characterization of protein–protein interactions by reprogramming yeast mating
2017 StandoutNobel
The effect of human mobility and control measures on the COVID-19 epidemic in China
2020 StandoutScience
A sex-biased imbalance between Tfr, Tph, and atypical B cells determines antibody responses in COVID-19 patients
2023 StandoutNobel
Induction of Cardiac Angptl4 by Dietary Fatty Acids Is Mediated by Peroxisome Proliferator-Activated Receptor β/δ and Protects Against Fatty Acid–Induced Oxidative Stress
2010
Risk of being killed by police use of force in the United States by age, race–ethnicity, and sex
2019 Standout
Signal integration in the endoplasmic reticulum unfolded protein response
2007 Standout
Building Predictive Models in R Using the caret Package
2008 Standout
A new criterion for assessing discriminant validity in variance-based structural equation modeling
2014 Standout
Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED
2015 StandoutNobel
Hierarchical Mechanisms for Direct Reprogramming of Fibroblasts to Neurons
2013 StandoutNobel
Genetic and Epigenetic Determinants of Neurogenesis and Myogenesis
2012
The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding
2011
An integrated encyclopedia of DNA elements in the human genome
2012 StandoutNature
Computational flow cytometry: helping to make sense of high-dimensional immunology data
2016
Transcription factor TEAD4 regulates expression of Myogenin and the unfolded protein response genes during C2C12 cell differentiation
2011
Genetic effects on gene expression across human tissues
2017 StandoutNature
Relative power and sample size analysis on gene expression profiling data
2009
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
2015 Standout
A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility
2016 Standout
Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
2014 Standout
The Human Transcription Factors
2018 Standout
An experimentally derived confidence score for binary protein-protein interactions
2008
Anterior tooth root morphology and size in Neanderthals: Taxonomic and functional implications
2012
Cicero Predicts cis-Regulatory DNA Interactions from Single-Cell Chromatin Accessibility Data
2018
Direct lineage conversions: unnatural but useful?
2011
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
2014 StandoutNobel
Comparison of endogenous and overexpressed MyoD shows enhanced binding of physiologically bound sites
2013
Hippo Pathway in Organ Size Control, Tissue Homeostasis, and Cancer
2015 Standout
Gene Expression and Physiologic Responses of the Heart to the Initiation and Withdrawal of Caloric Restriction
2006
Super-Enhancers in the Control of Cell Identity and Disease
2013 Standout
Cell-free nucleic acids as biomarkers in cancer patients
2011 Standout
Skeletal muscle programming and re-programming
2013
Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins
2011
Compensation of Signal Spillover in Suspension and Imaging Mass Cytometry
2018
Guidance of regulatory T cell development by Satb1-dependent super-enhancer establishment
2016 StandoutNobel
Comparison of RNA isolation and associated methods for extracellular RNA detection by high-throughput quantitative polymerase chain reaction
2016 StandoutNobel
Single‐cell mass cytometry adapted to measurements of the cell cycle
2012
Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations
2013
Transcription factors: from enhancer binding to developmental control
2012 Standout
Dimensionality reduction for visualizing single-cell data using UMAP
2018 Standout
New fossils from Jebel Irhoud, Morocco and the pan-African origin of Homo sapiens
2017 StandoutNature
Subnuclear segregation of genes and core promoter factors in myogenesis
2011 StandoutNobel
Improvement of the Threespine Stickleback Genome Using a Hi-C-Based Proximity-Guided Assembly
2017
Quantitative Models of the Mechanisms That Control Genome-Wide Patterns of Transcription Factor Binding during Early Drosophila Development
2011
Repertoires of Autophagy in the Pathogenesis of Ocular Diseases
2015 Standout
A novel and universal method for microRNA RT-qPCR data normalization
2009
Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade
2017 StandoutNobel
eRNAs Promote Transcription by Establishing Chromatin Accessibility at Defined Genomic Loci
2013
Efficient generation of mouse models of human diseases via ABE- and BE-mediated base editing
2018 Standout
Going the Distance for Protein Function Prediction: A New Distance Metric for Protein Interaction Networks
2013
MetaboAnalyst 3.0—making metabolomics more meaningful
2015 Standout
Comprehensive Integration of Single-Cell Data
2019 Standout
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
2013 Standout
Dynamic Chromatin Organization during Foregut Development Mediated by the Organ Selector Gene PHA-4/FoxA
2010
Molecular Roadblocks for Cellular Reprogramming
2012
Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
2013 Standout
Copper-Binding Small Molecule Induces Oxidative Stress and Cell-Cycle Arrest in Glioblastoma-Patient-Derived Cells
2018
Chronic Intermittent Hypoxia Induces Atherosclerosis via Activation of Adipose Angiopoietin-like 4
2013 StandoutNobel
Fibrosis, not cell size, delineates β-myosin heavy chain reexpression during cardiac hypertrophy and normal aging in vivo
2006 StandoutNobel
semPLS: Structural Equation Modeling Using Partial Least Squares
2012
Measuring individual differences in implicit cognition: The implicit association test.
1998 Standout
Collinearity: a review of methods to deal with it and a simulation study evaluating their performance
2012 Standout
opm: an R package for analysing OmniLog® phenotype microarray data
2013
Control of inositol 1,4,5-trisphosphate-induced Ca2+ release by cytosolic Ca2+
1995 Standout
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds
2017 StandoutScience
Oxidative stress, mitochondrial DNA mutation, and apoptosis in aging.
2007
influence.ME: Tools for Detecting Influential Data in Mixed Effects Models
2012
Downregulation of Apoptosis-Inducing Factor in Harlequin Mutant Mice Sensitizes the Myocardium to Oxidative Stress–Related Cell Death and Pressure Overload–Induced Decompensation
2005
Copper induces cell death by targeting lipoylated TCA cycle proteins
2022 StandoutScience
A protocol for data exploration to avoid common statistical problems
2009 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
mice: Multivariate Imputation by Chained Equations inR
2011 Standout
When to use and how to report the results of PLS-SEM
2018 Standout
The Hippo pathway member Yap plays a key role in influencing fate decisions in muscle satellite cells
2012
A Comparison of miRNA Isolation and RT-qPCR Technologies and their Effects on Quantification Accuracy and Repeatability
2013
The Split-Apply-Combine Strategy for Data Analysis
2011 Standout
Satellite Cells and the Muscle Stem Cell Niche
2013 Standout
DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila
2012
Rapid detection of structural variation in a human genome using nanochannel-based genome mapping technology
2014
Transcription factor and chromatin features predict genes associated with eQTLs
2012
Diverse and Specific Gene Expression Responses to Stresses in Cultured Human Cells
2004
Fitting Linear Mixed-Effects Models Usinglme4
2015 Standout
lmerTest Package: Tests in Linear Mixed Effects Models
2017 Standout

Works of Deepayan Sarkar being referenced

flowCore: a Bioconductor package for high throughput flow cytometry
2009
Coverage and error models of protein-protein interaction data by directed graph analysis
2007
Quality Assessment and Data Analysis for microRNA Expression Arrays
2008
Genome-wide MyoD Binding in Skeletal Muscle Cells: A Potential for Broad Cellular Reprogramming
2010
Age-related impairment of the transcriptional responses to oxidative stress in the mouse heart
2003
High-resolution human genome structure by single-molecule analysis
2010
Lattice: Multivariate Data Visualization with R
2008
Rankless by CCL
2026