Citation Impact

Citing Papers

Confirmation of intersubunit connectivity and topology of designed protein complexes by native MS
2018 StandoutNobel
An enumerative algorithm for de novo design of proteins with diverse pocket structures
2020 StandoutNobel
Generation of ordered protein assemblies using rigid three-body fusion
2021 StandoutNobel
Principles for designing proteins with cavities formed by curved β sheets
2017 StandoutScienceNobel
Topological control of cytokine receptor signaling induces differential effects in hematopoiesis
2019 StandoutScienceNobel
Exploiting conformational dynamics to modulate the function of designed proteins
2023 StandoutNobel
De novo design of transmembrane β barrels
2021 StandoutScienceNobel
De novo design of self-assembling helical protein filaments
2018 StandoutScienceNobel
Tight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion
2020 StandoutNobel
Hallucinating symmetric protein assemblies
2022 StandoutScienceNobel
Accurate computational design of multipass transmembrane proteins
2018 StandoutScienceNobel
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN
2024 StandoutNobel
Four-component protein nanocages designed by programmed symmetry breaking
2024 StandoutNatureNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
De novo design and directed folding of disulfide-bridged peptide heterodimers
2022 StandoutNobel
Computational design of soluble and functional membrane protein analogues
2024 StandoutNatureNobel
De novo design of immunoglobulin-like domains
2022 StandoutNobel
Sampling of structure and sequence space of small protein folds
2022 StandoutNobel
Directing polymorph specific calcium carbonate formation with de novo protein templates
2023 StandoutNobel
Multistate and functional protein design using RoseTTAFold sequence space diffusion
2024 StandoutNobel
Designing repeat proteins: a modular approach to protein design
2017
Multi-input chemical control of protein dimerization for programming graded cellular responses
2019 StandoutNobel
A Brief History of De Novo Protein Design: Minimal, Rational, and Computational
2021
Evolution of a designed protein assembly encapsulating its own RNA genome
2017 StandoutNatureNobel
Rational design of α-helical tandem repeat proteins with closed architectures
2015 StandoutNatureNobel
Role of backbone strain in de novo design of complex α/β protein structures
2021 StandoutNobel
Computational design of self-assembling cyclic protein homo-oligomers
2016 StandoutNobel
The coming of age of de novo protein design
2016 StandoutNatureNobel
Design of biologically active binary protein 2D materials
2021 StandoutNatureNobel
De novo design of bioactive protein switches
2019 StandoutNatureNobel
Design of multi-scale protein complexes by hierarchical building block fusion
2021 StandoutNobel
De Novo Evolutionary Emergence of a Symmetrical Protein Is Shaped by Folding Constraints
2016
De novo design of a non-local β-sheet protein with high stability and accuracy
2018 StandoutNobel
Computationally Designed Armadillo Repeat Proteins for Modular Peptide Recognition
2016 StandoutNobel
De novo protein design: how do we expand into the universe of possible protein structures?
2015
Exploring the repeat protein universe through computational protein design
2015 StandoutNatureNobel
Controlling protein assembly on inorganic crystals through designed protein interfaces
2019 StandoutNatureNobel
Protein sequence design with a learned potential
2022
Simple yet functional phosphate-loop proteins
2018 StandoutNobel
Accurate design of megadalton-scale two-component icosahedral protein complexes
2016 StandoutScienceNobel
Functional Proteins from Short Peptides: Dayhoff's Hypothesis Turns 50
2016
Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression
2015 StandoutNobel
Extreme stability in de novo-designed repeat arrays is determined by unusually stable short-range interactions
2018 StandoutNobel
De novo design of modular protein hydrogels with programmable intra- and extracellular viscoelasticity
2024 StandoutNobel
Ion-dependent protein–surface interactions from intrinsic solvent response
2021 StandoutNobel
Self-Assembling 2D Arrays with de Novo Protein Building Blocks
2019 StandoutNobel
Why reinvent the wheel? Building new proteins based on ready‐made parts
2016
Rotational dynamics and transition mechanisms of surface-adsorbed proteins
2022 StandoutNobel
Modular repeat protein sculpting using rigid helical junctions
2020 StandoutNobel
Computational design of mechanically coupled axle-rotor protein assemblies
2022 StandoutScienceNobel
De novo design of small beta barrel proteins
2023 StandoutNobel
Networks of electrostatic and hydrophobic interactions modulate the complex folding free energy surface of a designed βα protein
2019 StandoutNobel
Reshaping de Novo Protein Switches into Bioresponsive Materials for Biomarker, Toxin, and Viral Detection
2022 StandoutNobel
De novo design of protein homodimers containing tunable symmetric protein pockets
2022 StandoutNobel
Top-down design of protein architectures with reinforcement learning
2023 StandoutScienceNobel
Design of Heme Enzymes with a Tunable Substrate Binding Pocket Adjacent to an Open Metal Coordination Site
2023 StandoutNobel
Protein Assembly by Design
2021
Reconfigurable asymmetric protein assemblies through implicit negative design
2022 StandoutScienceNobel
A vocabulary of ancient peptides at the origin of folded proteins
2015

Works of David Simoncini being referenced

Computational design of a self-assembling symmetrical β-propeller protein
2014
Positive multistate protein design
2019
Rankless by CCL
2026