Citation Impact
Citing Papers
The Genetic Basis for Bacterial Mercury Methylation
2013 StandoutScience
RepeatModeler2 for automated genomic discovery of transposable element families
2020 Standout
A Global Protein Kinase and Phosphatase Interaction Network in Yeast
2010 Science
Machine learning predicts new anti-CRISPR proteins
2020 StandoutNobel
Integrating sequence, evolution and functional genomics in regulatory genomics
2009
De novo design of modular and tunable protein biosensors
2021 StandoutNatureNobel
Computationally designed sensors detect endogenous Ras activity and signaling effectors at subcellular resolution
2024 StandoutNobel
EGFR Antagonists in Cancer Treatment
2008 Standout
De Novo Prediction of Three-dimensional Structures for Major Protein Families
2002 StandoutNobel
Comprehensive Evaluation of Protein Structure Alignment Methods: Scoring by Geometric Measures
2005 StandoutNobel
A view on drug resistance in cancer
2019 StandoutNature
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
2010 Standout
EGFR Signal-Network Reconstruction Demonstrates Metabolic Crosstalk in EMT
2016
Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee
2006
Tumor adaptation and resistance to RAF inhibitors
2013
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
2015 Standout
Fluorescent Labeling of Purified β2 Adrenergic Receptor
1995 StandoutNobel
Cell Signaling by Receptor Tyrosine Kinases
2010 Standout
Strain differences in the rewarding and dopamine-releasing effects of morphine in rats
1995
Searching the Protein Structure Databank with Weak Sequence Patterns and Structural Constraints
2000
MUSCLE: multiple sequence alignment with high accuracy and high throughput
2004 Standout
MicroRNAs: Target Recognition and Regulatory Functions
2009 Standout
Clk post-transcriptional control denoises circadian transcription both temporally and spatially
2015 StandoutNobel
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
EGF–ERBB signalling: towards the systems level
2006 Standout
The impact of microRNAs on protein output
2008 StandoutNature
MAP kinase signalling pathways in cancer
2007 Standout
Protein-Protein Interactions and Prediction: A Comprehensive Overview
2013
A network-based integrative approach to prioritize reliable hits from multiple genome-wide RNAi screens in Drosophila
2009
Dali server: conservation mapping in 3D
2010 Standout
Membrane Fusion
2003 StandoutNobel
Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks
2012 StandoutNobel
Primary and acquired resistance to anti-EGFR targeted drugs in cancer therapy
2007
Advances and pitfalls of protein structural alignment
2009
A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes
2006 Standout
EMT: 2016
2016 Standout
β2-Adrenergic Receptor Signaling and Desensitization Elucidated by Quantitative Modeling of Real Time cAMP Dynamics
2007 StandoutNobel
Synthetic cell biology
2001
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
2008
Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system
2013
Recapitulation and Design of Protein Binding Peptide Structures and Sequences
2006 StandoutNobel
Network propagation: a universal amplifier of genetic associations
2017
Dynamics and control of the ERK signaling pathway: Sensitivity, bistability, and oscillations
2018
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
The Pfam protein families database
2011 Standout
Computational Design of a New Hydrogen Bond Network and at Least a 300-fold Specificity Switch at a Protein−Protein Interface
2006 StandoutNobel
Cholinergic binding sites on the pentameric acetylcholine receptor of Torpedo californica
1993
Cell-signalling dynamics in time and space
2006
Network and Data Integration for Biomarker Signature Discovery via Network Smoothed T-Statistics
2013
It's the machine that matters: Predicting gene function and phenotype from protein networks
2010
Virtual interaction profiles of proteins
2001
Exhaustive Enumeration of Protein Domain Families
2003
Cataloging the Relationships Between Proteins: A Review of Interaction Databases
2006
Evaluation of protein fold comparison servers
2003
Understanding eukaryotic linear motifs and their role in cell signaling and regulation
2008
starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data
2013 Standout
Structure Comparison and Structure Patterns
2000
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
2002 Standout
Preparation of 2-thioltryptophan-glucagon and (tryptophan-S-glucagon)2. Differences in binding to the glucagon receptor in the hepatic adenylate cyclase system.
1980 StandoutNobel
Learning from Imbalanced Data
2009 Standout
X-ray analysis of glucagon and its relationship to receptor binding
1975 Nature
Sequential resonance assignments in protein 1H nuclear magnetic resonance spectra
1982 StandoutNobel
Genetically Encoded Fluorescent Biosensors Illuminate the Spatiotemporal Regulation of Signaling Networks
2018
Hrr25 triggers selective autophagy–related pathways by phosphorylating receptor proteins
2014 StandoutNobel
Persistent ERK/MAPK Activation Promotes Lactotrope Differentiation and Diminishes Tumorigenic Phenotype
2014
Slip patterns and earthquake populations along different classes of faults in elastic solids
1995
Computational Approaches and Tools Used in Identification of Dispersed Repetitive DNA Sequences
2008
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
Enhanced Rewarding Properties of Morphine, but not Cocaine, in βarrestin-2 Knock-Out Mice
2003 StandoutNobel
Conformation of glucagon in a lipid-water interphase by 1H nuclear magnetic resonance
1983 StandoutNobel
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
2009 Standout
Strong negative feedback from Erk to Raf confers robustness to MAPK signalling
2011
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
A reassessment of structure-function relationships in glucagon. Glucagon1-21 is a full agonist.
1978 StandoutNobel
Temporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiation
2015
Computational prediction of human metabolic pathways from the complete human genome
2004
Atg38 is required for autophagy-specific phosphatidylinositol 3-kinase complex integrity
2013 StandoutNobel
Chemotherapy triggers HIF-1–dependent glutathione synthesis and copper chelation that induces the breast cancer stem cell phenotype
2015 StandoutNobel
CRISPR-Cas guides the future of genetic engineering
2018 StandoutScienceNobel
The return of metabolism: biochemistry and physiology of the pentose phosphate pathway
2014 Standout
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
Competing G protein‐coupled receptor kinases balance G protein and β‐arrestin signaling
2012 StandoutNobel
A review of feature selection techniques in bioinformatics
2007 Standout
Earthquakes and friction laws
1998 StandoutNature
Chemical Glycoproteomics
2016 StandoutNobel
Works of David Gilbert being referenced
Handling Uncertainty in Dynamic Models: The Pentose Phosphate Pathway in Trypanosoma brucei
2013
A computer system to perform structure comparison using TOPS representations of protein structure
2001
Representing and Analysing Molecular and Cellular Function Using the Computer
2000
Multiple structural alignment for distantly related all structures using TOPS pattern discovery and simulated annealing
2003
When kinases meet mathematics: the systems biology of MAPK signalling
2005
Approaches to the Automatic Discovery of Patterns in Biosequences
1998
Cell fate decisions are specified by the dynamic ERK interactome
2009
Prediction of protein-protein interaction types using association rule based classification
2009
Feature Selection and the Class Imbalance Problem in Predicting Protein Function from Sequence
2005
Computational methodologies for modelling, analysis and simulation of signalling networks
2006
GeneRank: Using search engine technology for the analysis of microarray experiments
2005
MSAT
2004
Predicting protein function by machine learning on amino acid sequences – a critical evaluation
2007
Protein structure topological comparison, discovery and matching service
2005
β-phenylethylamine-, D-amphetamine- and L-amphetamine-induced place preference conditioning in rats
1983
A novel method for comparing topological models of protein structures enhanced with ligand information
2008
Graph-Based Analysis of Metabolic Networks
2002
Pseudosymmetry in the structure of luteinizing hormone-releasing hormone. Series of novel analogs
1975
Ensemble machine learning on gene expression data for cancer classification.
2003
The Mammalian MAPK/ERK Pathway Exhibits Properties of a Negative Feedback Amplifier
2010
Assessment of the probabilities for evolutionary structural changes in protein folds
2007
Sensitivity of self-potentiating effect of luteinising hormone-releasing hormone to cycloheximide
1975 Nature
Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway
2005
Multi-class protein fold classification using a new ensemble machine learning approach.
2003