Citation Impact
Citing Papers
A sex-biased imbalance between Tfr, Tph, and atypical B cells determines antibody responses in COVID-19 patients
2023 StandoutNobel
Crippling life support for SARS-CoV-2 and other viruses through synthetic lethality
2020 StandoutNobel
fastp: an ultra-fast all-in-one FASTQ preprocessor
2018 Standout
IFN-γ-induced Th1-Treg polarization in inflamed brains limits exacerbation of experimental autoimmune encephalomyelitis
2024
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors
2019 Standout
SEACells infers transcriptional and epigenomic cellular states from single-cell genomics data
2023
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions
2021 StandoutNobel
Single-cell analysis of a mutant library generated using CRISPR-guided deaminase in human melanoma cells
2020
Hypoxia and intra-complex genetic suppressors rescue complex I mutants by a shared mechanism
2024 StandoutNobel
Engineered receptors for soluble cellular communication and disease sensing
2024 StandoutNatureNobel
CellTag Indexing: genetic barcode-based sample multiplexing for single-cell genomics
2019
Inference and analysis of cell-cell communication using CellChat
2021 Standout
Platelet factor 4–induced T H 1-T reg polarization suppresses antitumor immunity
2024 StandoutScienceNobel
The promise and challenge of therapeutic genome editing
2020 StandoutNatureNobel
Deciphering cell–cell interactions and communication from gene expression
2020
SCANPY: large-scale single-cell gene expression data analysis
2018 Standout
Genome-wide CRISPR Screens in Primary Human T Cells Reveal Key Regulators of Immune Function
2018
Challenges and emerging directions in single-cell analysis
2017
Hepatic stellate cells as key target in liver fibrosis
2017
An exposome perspective: Early-life events and immune development in a changing world
2017
The Amyloid-β Pathway in Alzheimer’s Disease
2021
A view on drug resistance in cancer
2019 StandoutNature
Molecular Architecture of the Mouse Nervous System
2018 Standout
Single-cell-resolution transcriptome map of human, chimpanzee, bonobo, and macaque brains
2020 StandoutNobel
Fast, sensitive and accurate integration of single-cell data with Harmony
2019 Standout
A Genome-wide Framework for Mapping Gene Regulation via Cellular Genetic Screens
2019
Chronic inflammation in the etiology of disease across the life span
2019 Standout
Am I ready for CRISPR? A user's guide to genetic screens
2017
Hallmarks of aging: An expanding universe
2023 Standout
Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
2017
Ferroptosis turns 10: Emerging mechanisms, physiological functions, and therapeutic applications
2022 Standout
Effective gene expression prediction from sequence by integrating long-range interactions
2021 StandoutNobel
A CRISPR toolbox to study virus–host interactions
2017
Comprehensive Profiling of an Aging Immune System Reveals Clonal GZMK+ CD8+ T Cells as Conserved Hallmark of Inflammaging
2020
The changing landscape of atherosclerosis
2021 StandoutNature
Hepatocellular carcinoma
2021 Standout
Diverse partial reprogramming strategies restore youthful gene expression and transiently suppress cell identity
2022
Effects of extracellular matrix viscoelasticity on cellular behaviour
2020 StandoutNature
Recovering Gene Interactions from Single-Cell Data Using Data Diffusion
2018
Integrating single-cell transcriptomic data across different conditions, technologies, and species
2018 Standout
TCF1 in T cell immunity: a broadened frontier
2021
The single-cell transcriptional landscape of mammalian organogenesis
2019 StandoutNature
Variant Interpretation: Functional Assays to the Rescue
2017
Synthetic lethality as an engine for cancer drug target discovery
2019
High-performance medicine: the convergence of human and artificial intelligence
2018 Standout
High-Throughput Approaches to Pinpoint Function within the Noncoding Genome
2017
Multimodal biomedical AI
2022 Standout
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
2020 Standout
Functional interrogation of a SARS-CoV-2 host protein interactome identifies unique and shared coronavirus host factors
2020 StandoutNobel
CRISPR/Cas9-Based Engineering of the Epigenome
2017
Deconstructing cerebellar development cell by cell
2020
Liquid biopsies come of age: towards implementation of circulating tumour DNA
2017 Standout
Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
2019 Standout
Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
2020 Standout
Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing
2021
Bridge helix arginines play a critical role in Cas9 sensitivity to mismatches
2020 StandoutNobel
Genome-wide CRISPRi/a screens in human neurons link lysosomal failure to ferroptosis
2021
Dictionary learning for integrative, multimodal and scalable single-cell analysis
2023 Standout
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19
2020 Standout
PROTAC targeted protein degraders: the past is prologue
2022 Standout
Pooled Knockin Targeting for Genome Engineering of Cellular Immunotherapies
2020
Genome-Scale Identification of SARS-CoV-2 and Pan-coronavirus Host Factor Networks
2020 StandoutNobel
Joint single-cell measurements of nuclear proteins and RNA in vivo
2021
The next generation of CRISPR–Cas technologies and applications
2019
Dimensionality reduction for visualizing single-cell data using UMAP
2018 Standout
Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin
2020
Integrated digital error suppression for improved detection of circulating tumor DNA
2016
Pooled CRISPR screening with single-cell transcriptome readout
2017
A new era in functional genomics screens
2021
Synthetic lethal therapies for cancer: what’s next after PARP inhibitors?
2018
Synthetic lethality and cancer
2017
Optical Pooled Screens in Human Cells
2019
Massively parallel single-nucleus RNA-seq with DroNc-seq
2017
MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices
2019
De novo design of tyrosine and serine kinase-driven protein switches
2021 StandoutNobel
Systems immunology: just getting started
2017
Integrative single-cell analysis
2019
Comprehensive Integration of Single-Cell Data
2019 Standout
Inhibition of SARS-CoV-2 Infections in Engineered Human Tissues Using Clinical-Grade Soluble Human ACE2
2020 Standout
Single-cell transcriptomic analysis of Alzheimer’s disease
2019 StandoutNature
Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
CADD: predicting the deleteriousness of variants throughout the human genome
2018 Standout
A Toolkit for Rapid Modular Construction of Biological Circuits in Mammalian Cells
2019
Single Cell RNA Sequencing in Atherosclerosis Research
2020
Lecanemab in Early Alzheimer’s Disease
2022 Standout
3D Brain Organoids: Studying Brain Development and Disease Outside the Embryo
2020
Single-cell transcriptomics to explore the immune system in health and disease
2017 Science
CRISPRi and CRISPRa Screens in Mammalian Cells for Precision Biology and Medicine
2017
Material microenvironmental properties couple to induce distinct transcriptional programs in mammalian stem cells
2018
The Human Cell Atlas
2017
Longer metaphase and fewer chromosome segregation errors in modern human than Neanderthal brain development
2022 StandoutNobel
Molecular transitions in early progenitors during human cord blood hematopoiesis
2018
Genome-wide association studies
2021
Evolutionary-scale prediction of atomic-level protein structure with a language model
2023 StandoutScience
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
2022 Standout
Early loss of mitochondrial complex I and rewiring of glutathione metabolism in renal oncocytoma
2018
CRISPR-Cas guides the future of genetic engineering
2018 StandoutScienceNobel
Top-down design of protein architectures with reinforcement learning
2023 StandoutScienceNobel
CRISPOR: intuitive guide selection for CRISPR/Cas9 genome editing experiments and screens
2018 Standout
Works of Danielle Dionne being referenced
Nuclei multiplexing with barcoded antibodies for single-nucleus genomics
2019
Checkpoint Blockade Immunotherapy Induces Dynamic Changes in PD-1−CD8+ Tumor-Infiltrating T Cells
2019
Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity
2021
Single-cell transcriptomic profiling of the aging mouse brain
2019
Effects of 3D culturing conditions on the transcriptomic profile of stem-cell-derived neurons
2018
Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens
2016
Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation
2013
The Human and Mouse Enteric Nervous System at Single-Cell Resolution
2020
Disease-associated astrocytes in Alzheimer’s disease and aging
2020