Citation Impact
Citing Papers
RepeatModeler2 for automated genomic discovery of transposable element families
2020 Standout
Molecular evidence for a single evolutionary origin of domesticated rice
2011
An SNP Caused Loss of Seed Shattering During Rice Domestication
2006 Science
Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene
2007 Standout
The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
2011 Standout
Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
2010 Standout
Repbase Update, a database of repetitive elements in eukaryotic genomes
2015 Standout
Genome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct dynamics of individual copia families
2007
Variation in NRT1.1B contributes to nitrate-use divergence between rice subspecies
2015 Standout
Leveraging natural diversity: back through the bottleneck
2008
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
2011 Standout
Three geographically separate domestications of Asian rice
2015
Patterns and processes in crop domestication: an historical review and quantitative analysis of 203 global food crops
2012 Standout
Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice
2008 Standout
The Molecular Genetics of Crop Domestication
2006 Standout
From forest to field: Perennial fruit crop domestication
2011 Standout
Parasitism and the retrotransposon life cycle in plants: a hitchhiker's guide to the genome
2006
A Novel Integrated Method for Large-Scale Detection, Identification, and Quantification of Widely Targeted Metabolites: Application in the Study of Rice Metabolomics
2013 Standout
Genome-Wide Patterns of Nucleotide Polymorphism in Domesticated Rice
2007
Improved detection and annotation of transposable elements in sequenced genomes using multiple reference sequence sets
2008
Global Dissemination of a Single Mutation Conferring White Pericarp in Rice
2007
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
2006 StandoutNature
Chloroplast DNA insertions into the nuclear genome of rice: the genes, sites and ages of insertion involved
2007
The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences
2007
New insights into the history of rice domestication
2007
Inference of the japonica Rice Domestication Process from the Distribution of Six Functional Nucleotide Polymorphisms of Domestication-Related Genes in Various Landraces and Modern Cultivars
2008
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
2012 Standout
Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection
2010 Standout
Structure of genetic diversity in the two major gene pools of common bean (Phaseolus vulgaris L., Fabaceae)
2009
Positive and Negative Selection on Mammalian Y Chromosomes
2005
Evolution of crop species: genetics of domestication and diversification
2013 Standout
Molecular insights into the evolution of crop plants
2008
LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons
2007 Standout
Early agricultural pathways: moving outside the ‘core area’ hypothesis in Southwest Asia
2011
The evolution of nuclear genome structure in seed plants
2004
Genetic control of rice plant architecture under domestication
2008
A unified classification system for eukaryotic transposable elements
2007 Standout
The map-based sequence of the rice genome
2005 StandoutNature
Cucumber ( Cucumis sativus ) and melon ( C. melo ) have numerous wild relatives in Asia and Australia, and the sister species of melon is from Australia
2010 Standout
Systematics and phylogeny of the Brassicaceae (Cruciferae): an overview
2006 Standout
Agricultural Origins and Frontiers in South Asia: A Working Synthesis
2007 Standout
Genetic variation in the chloroplast genome suggests multiple domestication of cultivated Asian rice (Oryza sativa L.)
2007
Multilocus Methods for Estimating Population Sizes, Migration Rates and Divergence Time, With Applications to the Divergence of Drosophila pseudoobscura and D. persimilis
2004 Standout
Distribution, diversity, evolution, and survival of Helitrons in the maize genome
2009
Active Transposition in Genomes
2012
Genome sequencing and analysis of the model grass Brachypodium distachyon
2010 StandoutNature
Consilience of genetics and archaeobotany in the entangled history of rice
2010
Was Asian Rice (Oryza sativa) Domesticated More Than Once?
2008
Computational Molecular Evolution
2006 Standout
FRIZZY PANICLEis required to prevent the formation of axillary meristems and to establish floral meristem identity in rice spikelets
2003
A Genomic Scan for Selection Reveals Candidates for Genes Involved in the Evolution of Cultivated Sunflower (Helianthus annuus)
2008 Standout
Between China and South Asia: A Middle Asian corridor of crop dispersal and agricultural innovation in the Bronze Age
2016 Standout
Rapid recent growth and divergence of rice nuclear genomes
2004
Finding Plant Domestication in the Indian Subcontinent
2011
DNA Transposons and the Evolution of Eukaryotic Genomes
2007
The Puzzle of Rice Domestication
2007
Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice
2006 Standout
Agricultural Origins and Frontiers in South Asia: A Working Synthesis
2006 Standout
Effective Population Size and Population Subdivision in Demographically Structured Populations
2002
Phylogeography of Asian wild rice, Oryza rufipogon , reveals multiple independent domestications of cultivated rice, Oryza sativa
2006
Nonindependent Domestication of the Two Rice Subspecies,Oryza sativassp.indicaand ssp.japonica, Demonstrated by Multilocus Microsatellites
2008
Structure-based discovery and description of plant and animal Helitrons
2009
A Review of Natural Fibers Used in Biocomposites: Plant, Animal and Regenerated Cellulose Fibers
2015 Standout
Analysis of Intraspecies Diversity in Wheat and Barley Genomes Identifies Breakpoints of Ancient Haplotypes and Provides Insight into the Structure of Diploid and Hexaploid Triticeae Gene Pools
2008
Archaeogenetic study of prehistoric rice remains from Thailand and India: evidence of early japonica in South and Southeast Asia
2015
Works of Clémentine Vitte being referenced
A GeneTrek analysis of the maize genome
2007
Formation of Solo-LTRs Through Unequal Homologous Recombination Counterbalances Amplifications of LTR Retrotransposons in Rice Oryza sativa L.
2003
Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.)
2004
LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss
2007
LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model
2005
DNA Diversity in Sex-Linked and Autosomal Genes of the Plant Species Silene latifolia and Silene dioica
2001
Characterization of transposable elements in the genome of rice (Oryza sativa L.) using Representational Difference Analysis (RDA)
2002
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution
2006