Citation Impact
Citing Papers
TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells
2017 Standout
RepeatModeler2 for automated genomic discovery of transposable element families
2020 Standout
CUL3 and NRF2 Mutations Confer an NRF2 Activation Phenotype in a Sporadic Form of Papillary Renal Cell Carcinoma
2013
Patient HLA class I genotype influences cancer response to checkpoint blockade immunotherapy
2017 Science
Temporally Distinct PD-L1 Expression by Tumor and Host Cells Contributes to Immune Escape
2017
A Phase I Study of the AKT Inhibitor MK-2206 in Combination with Hormonal Therapy in Postmenopausal Women with Estrogen Receptor–Positive Metastatic Breast Cancer
2016
Genomes of replicatively senescent cells undergo global epigenetic changes leading to gene silencing and activation of transposable elements
2013
High burden and pervasive positive selection of somatic mutations in normal human skin
2015 StandoutScience
Transposition-Driven Genomic Heterogeneity in the Drosophila Brain
2013 StandoutScienceNobel
A Phase I Trial of BKM120 (Buparlisib) in Combination with Fulvestrant in Postmenopausal Women with Estrogen Receptor–Positive Metastatic Breast Cancer
2015
Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
2017 Science
fastp: an ultra-fast all-in-one FASTQ preprocessor
2018 Standout
The Ensembl Variant Effect Predictor
2016 Standout
Ten things you should know about transposable elements
2018
Mutational landscape and significance across 12 major cancer types
2013 StandoutNature
Senescent cells harbour features of the cancer epigenome
2013
An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers
2013
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
2014 Standout
Regulation of microRNA biogenesis
2014 Standout
The evolving landscape of biomarkers for checkpoint inhibitor immunotherapy
2019 Standout
Clonal Heterogeneity and Tumor Evolution: Past, Present, and the Future
2017 Standout
Hallmarks of aging: An expanding universe
2023 Standout
Classification and mutation prediction from non–small cell lung cancer histopathology images using deep learning
2018 Standout
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
Pancreatic cancer
2016 Standout
Clinical Practice Guideline for Screening and Management of High Blood Pressure in Children and Adolescents
2017 Standout
Computational genomics tools for dissecting tumour–immune cell interactions
2016
The role of retrotransposable elements in ageing and age-associated diseases
2021 Nature
Expanding the computational toolbox for mining cancer genomes
2014
MPDL3280A (anti-PD-L1) treatment leads to clinical activity in metastatic bladder cancer
2014 StandoutNature
Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
2015 Standout
The landscape of long noncoding RNAs in the human transcriptome
2015 Standout
Cellular senescence in ageing: from mechanisms to therapeutic opportunities
2020 Standout
Genetic Alterations Associated With Progression From Pancreatic Intraepithelial Neoplasia to Invasive Pancreatic Tumor
2013
High-performance medicine: the convergence of human and artificial intelligence
2018 Standout
Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy
2013 Standout
Regulation and Function of the PD-L1 Checkpoint
2018 Standout
Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation
2017 Standout
The Microprocessor controls the activity of mammalian retrotransposons
2013
cDNA Hybrid Capture Improves Transcriptome Analysis on Low-Input and Archived Samples
2014
Long non-coding RNAs as novel targets for therapy in hepatocellular carcinoma
2016
LINE1 Derepression in Aged Wild-Type and SIRT6-Deficient Mice Drives Inflammation
2019
An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage
2014 Standout
Coming of age: ten years of next-generation sequencing technologies
2016 Standout
Single-Neuron Sequencing Analysis of L1 Retrotransposition and Somatic Mutation in the Human Brain
2012
Assembly of long, error-prone reads using repeat graphs
2019 Standout
Gut microbiota, metabolites and host immunity
2016 Standout
Translation of genomics-guided RNA-based personalised cancer vaccines: towards the bedside
2014
The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
2014 Standout
The molecular landscape of head and neck cancer
2018 Standout
Glypican-1 identifies cancer exosomes and detects early pancreatic cancer
2015 StandoutNature
AKT/PKB Signaling: Navigating the Network
2017 Standout
The role of senescent cells in ageing
2014 StandoutNature
Epithelial sodium channel (ENaC) family: Phylogeny, structure–function, tissue distribution, and associated inherited diseases
2016
Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade
2017 StandoutNobel
Efficient generation of mouse models of human diseases via ABE- and BE-mediated base editing
2018 Standout
The PI3K Pathway in Human Disease
2017 Standout
A survey of tools for variant analysis of next-generation genome sequencing data
2013
Illumina TruSeq Synthetic Long-Reads Empower De Novo Assembly and Resolve Complex, Highly-Repetitive Transposable Elements
2014
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
2012 Standout
Maftools: efficient and comprehensive analysis of somatic variants in cancer
2018 Standout
PIWI proteins and PIWI-interacting RNAs in the soma
2014 Nature
Discovery and saturation analysis of cancer genes across 21 tumour types
2014 StandoutNature
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
2017 Standout
SpeedSeq: ultra-fast personal genome analysis and interpretation
2015
The microbial nitrogen-cycling network
2018 Standout
Recurrent SERPINB3 and SERPINB4 mutations in patients who respond to anti-CTLA4 immunotherapy
2016
HIF activation causes synthetic lethality between the VHL tumor suppressor and the EZH1 histone methyltransferase
2017 StandoutNobel
Making a virtue of necessity: the pleiotropic role of human endogenous retroviruses in cancer
2017
Exosomes
2019 Standout
2015
Whole exome sequencing identifies ATRX mutation as a key molecular determinant in lower-grade glioma
2012
Long Noncoding RNA and Cancer: A New Paradigm
2017 Standout
Decoupling function and taxonomy in the global ocean microbiome
2016 StandoutScience
Longer metaphase and fewer chromosome segregation errors in modern human than Neanderthal brain development
2022 StandoutNobel
Genomic mosaicism in the developing and adult brain
2018
Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla
2015
ExSPAnder: a universal repeat resolver for DNA fragment assembly
2014
The KEAP1-NRF2 System: a Thiol-Based Sensor-Effector Apparatus for Maintaining Redox Homeostasis
2018 Standout
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
2011 Standout
JointSNVMix: a probabilistic model for accurate detection of somatic mutations in normal/tumour paired next-generation sequencing data
2012
DNA Methylation Alterations Exhibit Intraindividual Stability and Interindividual Heterogeneity in Prostate Cancer Metastases
2013
Strelka: accurate somatic small-variant calling from sequenced tumor–normal sample pairs
2012
Neoantigens in cancer immunotherapy
2015 StandoutScience
A machine learning approach for somatic mutation discovery
2018
Subclonal variant calling with multiple samples and prior knowledge
2014
Works of Christopher Harris being referenced
Retrotransposition of gene transcripts leads to structural variation in mammalian genomes
2013
Mutations in the beta-subunit of the epithelial Na+ channel in patients with a cystic fibrosis-like syndrome
2005
Genomic and Metabolic Diversity of Marine Group I Thaumarchaeota in the Mesopelagic of Two Subtropical Gyres
2014
Landscape of Somatic Retrotransposition in Human Cancers
2012 Science
Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount
2014
SomaticSniper: identification of somatic point mutations in whole genome sequencing data
2011