Citation Impact
Citing Papers
Small Peptides Switch the Transcriptional Activity of Shavenbaby During Drosophila Embryogenesis
2010 Science
Computational Design of Self-Assembling Protein Nanomaterials with Atomic Level Accuracy
2012 StandoutScienceNobel
Requirement of bic/microRNA-155 for Normal Immune Function
2007 StandoutScience
Circulating microRNAs as stable blood-based markers for cancer detection
2008 Standout
Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways
2013 StandoutScience
Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters
2008 StandoutScience
Macrophages as APC and the Dendritic Cell Myth
2008
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
An integrated encyclopedia of DNA elements in the human genome
2012 StandoutNature
Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes
2010
lincRNAs: Genomics, Evolution, and Mechanisms
2013 Standout
Calcium activated K+ channels in the electroreceptor of the skate confirmed by cloning. Details of subunits and splicing
2015
The Genetic Signatures of Noncoding RNAs
2009
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
2012 StandoutNature
Circular RNAs are a large class of animal RNAs with regulatory potency
2013 StandoutNature
A genome-wide screen for noncoding elements important in primate evolution
2008
Cadherins and catenins at synapses: roles in synaptogenesis and synaptic plasticity
2008
RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage
2010
Alternative isoform regulation in human tissue transcriptomes
2008 StandoutNature
Modular regulatory principles of large non-coding RNAs
2012 StandoutNature
The GENCODE pseudogene resource
2012
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
2009 StandoutNature
Multiplex pairwise assembly of array-derived DNA oligonucleotides
2015 StandoutNobel
Performance and Scalability of Discriminative Metrics for Comparative Gene Identification in 12 Drosophila Genomes
2008
Accurate design of co-assembling multi-component protein nanomaterials
2014 StandoutNatureNobel
A deficit of detoxification enzymes: pesticide sensitivity and environmental response in the honeybee
2006
Pattern Recognition Receptors and Inflammation
2010 Standout
A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?
2011 Standout
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
2007 Standout
Nanoscale elongating control of the self‐assembled protein filament with the cysteine‐introduced building blocks
2009
Molecular basis of ancestral vertebrate electroreception
2017 StandoutNatureNobel
The multilayered complexity of ceRNA crosstalk and competition
2014 StandoutNature
Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities
2008
Mammalian RNA polymerase II core promoters: insights from genome-wide studies
2007
Systems biology of innate immunity
2008
Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae
2011
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
2007
CombiMatrix oligonucleotide arrays: Genotyping and gene expression assays employing electrochemical detection
2006
High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis
2009
Raising the estimate of functional human sequences: Figure 1.
2007
Tumour invasion and metastasis initiated by microRNA-10b in breast cancer
2007 StandoutNature
Natural RNA circles function as efficient microRNA sponges
2013 StandoutNature
Lineage-Specific Polycomb Targets and De Novo DNA Methylation Define Restriction and Potential of Neuronal Progenitors
2008
Ancestral polyploidy in seed plants and angiosperms
2011 StandoutNature
A genomic analysis of RNA polymerase II modification and chromatin architecture related to 3′ end RNA polyadenylation
2008
The primary transcriptome of the major human pathogen Helicobacter pylori
2010 StandoutNature
Genomic and Transcriptional Co-Localization of Protein-Coding and Long Non-Coding RNA Pairs in the Developing Brain
2009
Neuroligins and neurexins link synaptic function to cognitive disease
2008 StandoutNatureNobel
Insights into social insects from the genome of the honeybee Apis mellifera
2006 StandoutNature
MicroRNA signatures in human cancers
2006 Standout
TOLL-LIKE RECEPTORS IN ISCHEMIA-REPERFUSION INJURY
2009
Exosomes facilitate therapeutic targeting of oncogenic KRAS in pancreatic cancer
2017 StandoutNature
Signaling to NF-κB
2004 Standout
RNA-Seq: a revolutionary tool for transcriptomics
2008 Standout
A mutually exclusive alternative exon of slo 1 codes for a neuronal BK channel with altered function
2008
Molecular tuning of electroreception in sharks and skates
2018 StandoutNatureNobel
An RNA-Seq Strategy to Detect the Complete Coding and Non-Coding Transcriptome Including Full-Length Imprinted Macro ncRNAs
2011
Modeling gene expression using chromatin features in various cellular contexts
2012
Expression of distinct RNAs from 3′ untranslated regions
2010
Widespread transcription at neuronal activity-regulated enhancers
2010 StandoutNature
A coding-independent function of gene and pseudogene mRNAs regulates tumour biology
2010 StandoutNature
Macrophage biology in development, homeostasis and disease
2013 StandoutNature
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
2010 StandoutNature
lincRNAs act in the circuitry controlling pluripotency and differentiation
2011 StandoutNature
What is a gene, post-ENCODE? History and updated definition
2007
Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates
2009
The Human Condition—A Molecular Approach
2014 StandoutNobel
The Polycomb complex PRC2 and its mark in life
2011 StandoutNature
The evolution of gene expression levels in mammalian organs
2011 StandoutNatureNobel
Accurate design of megadalton-scale two-component icosahedral protein complexes
2016 StandoutScienceNobel
New perspectives on the diversification of theRNA interference system: insights from comparative genomics and smallRNA sequencing
2013
Alternative Splicing: New Insights from Global Analyses
2006
Specific expression of long noncoding RNAs in the mouse brain
2008
Improving Protein Expression, Stability, and Function with ProteinMPNN
2024 StandoutNobel
The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
2008 StandoutScience
Highly Specific Alternative Splicing of Transcripts Encoding BK Channels in the Chicken's Cochlea Is a Minor Determinant of the Tonotopic Gradient
2010
Systems analysis identifies an essential role for SHANK-associated RH domain-interacting protein (SHARPIN) in macrophage Toll-like receptor 2 (TLR2) responses
2011 StandoutNobel
A Guide to the Mammalian Genome: Figure 1
2003
Convergent Evolution of Alternative Splices at Domain Boundaries of the BK Channel
2008
Posttranslational hydroxylation of ankyrin repeats in IκB proteins by the hypoxia-inducible factor (HIF) asparaginyl hydroxylase, factor inhibiting HIF (FIH)
2006 StandoutNobel
A bacterial Argonaute with noncanonical guide RNA specificity
2016 StandoutNobel
Nomenclature of monocytes and dendritic cells in blood
2010 Standout
Regulation of apoptosis by the circadian clock through NF-κB signaling
2011 StandoutNobel
A systematic dissection of determinants and consequences of snoRNA-guided pseudouridylation of human mRNA
2022 StandoutNobel
UniRef: comprehensive and non-redundant UniProt reference clusters
2007
The Eukaryotic Genome as an RNA Machine
2008 Science
Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing
2013
Design of a hyperstable 60-subunit protein icosahedron
2016 StandoutNatureNobel
Dual function of C/D box small nucleolar RNAs in rRNA modification and alternative pre-mRNA splicing
2016
Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids
2008
ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles
2008
Works of Chikatoshi Kai being referenced
Alternate transcription of the Toll-like receptor signaling cascade
2006
The PDZ Protein Tax-interacting Protein-1 Inhibits β-Catenin Transcriptional Activity and Growth of Colorectal Cancer Cells
2003
Dynamic usage of transcription start sites within core promoters
2006
Clusters of Internally Primed Transcripts Reveal Novel Long Noncoding RNAs
2006
CAGE: cap analysis of gene expression
2006
Mice and Men: Their Promoter Properties
2006
Heterotachy in Mammalian Promoter Evolution
2006
Discrimination of Non-Protein-Coding Transcripts from Protein-Coding mRNA
2006
Diversity of Ca2+-activated K+ channel transcripts in inner ear hair cells
2006
Evolutionary turnover of mammalian transcription start sites
2006
A Simple Physical Model Predicts Small Exon Length Variations
2006
Differential Use of Signal Peptides and Membrane Domains Is a Common Occurrence in the Protein Output of Transcriptional Units
2006
Hidden layers of human small RNAs
2008
Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases
2006
The Mammalian Protein–Protein Interaction Database and Its Viewing System That Is Linked to the Main FANTOM2 Viewer
2003
Pseudo–Messenger RNA: Phantoms of the Transcriptome
2006
The Abundance of Short Proteins in the Mammalian Proteome
2006
Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters
2006
NF‐κB activator Act1 associates with IL‐1/Toll pathway adaptor molecule TRAF6
2002