Citation Impact
Citing Papers
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database
2021 Standout
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
2018 Standout
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
2014 Standout
Inference of Network Dynamics and Metabolic Interactions in the Gut Microbiome
2015
Gut microbiota functions: metabolism of nutrients and other food components
2017 Standout
A footprint of desiccation tolerance in the genome of Xerophyta viscosa
2017
Next-Generation Sequence Assembly: Four Stages of Data Processing and Computational Challenges
2013
The Role of Short-Chain Fatty Acids From Gut Microbiota in Gut-Brain Communication
2020 Standout
Genomic features of the damselfly Calopteryx splendens representing a sister clade to most insect orders
2017
The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole-genome sequencing
2017
Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation
2017 Standout
Current understanding of the human microbiome
2018 Standout
MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
2016
Fast and accurate de novo genome assembly from long uncorrected reads
2017 Standout
HDAC Inhibitor Sodium Butyrate-Mediated Epigenetic Regulation Enhances Neuroprotective Function of Microglia During Ischemic Stroke
2016
Soup to Tree: The Phylogeny of Beetles Inferred by Mitochondrial Metagenomics of a Bornean Rainforest Sample
2015
Assembly of long, error-prone reads using repeat graphs
2019 Standout
Species Identification in Malaise Trap Samples by DNA Barcoding Based on NGS Technologies and a Scoring Matrix
2016
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
2017 Standout
metaSPAdes: a new versatile metagenomic assembler
2017 Standout
Evolutionary history of Coleoptera revealed by extensive sampling of genes and species
2018 Standout
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
2017 Standout
Sequence assembly demystified
2013
Integrating gut microbiota immaturity and disease‐discriminatory taxa to diagnose the initiation and severity of shrimp disease
2017 Standout
Soil quality – A critical review
2018 Standout
BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics
2017 Standout
A review of biodiversity-related issues and challenges in megadiverse Indonesia and other Southeast Asian countries
2017 Standout
The State of the World's Mangrove Forests: Past, Present, and Future
2019 Standout
A Survey of Autonomous Driving: Common Practices and Emerging Technologies
2020 Standout
Metabarcoding: A powerful tool to investigate microbial communities and shape future plant protection strategies
2017
A general species delimitation method with applications to phylogenetic placements
2013 Standout
Microbiome-wide association studies link dynamic microbial consortia to disease
2016 Nature
Third generation sequencing: technology and its potential impact on evolutionary biodiversity research
2015
Event-Based Vision: A Survey
2020
Works of Chengxi Ye being referenced
Unsupervised Learning of Dense Optical Flow and Depth from Sparse Event Data.
2018
Sparc: a sparsity-based consensus algorithm for long erroneous sequencing reads
2016
Network analysis suggests a potentially ‘evil’ alliance of opportunistic pathogens inhibited by a cooperative network in human milk bacterial communities
2015
Exploiting sparseness in de novo genome assembly
2012
DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies
2016
Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
2012