Citation Impact
Citing Papers
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
2005 Standout
Computational Design of Self-Assembling Protein Nanomaterials with Atomic Level Accuracy
2012 StandoutScienceNobel
Sequencing and Analysis of Neanderthal Genomic DNA
2006 StandoutScienceNobel
Structure of the human TRPM4 ion channel in a lipid nanodisc
2017 StandoutScienceNobel
A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
2012 StandoutScienceNobel
Computational design of a protein crystal
2012
Evolution of a virus-like architecture and packaging mechanism in a repurposed bacterial protein
2021 Science
Computational Design of an Enzyme Catalyst for a Stereoselective Bimolecular Diels-Alder Reaction
2010 StandoutScienceNobel
An Extensive Class of Small RNAs in Caenorhabditis elegans
2001 StandoutScienceNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
2011 Standout
Negative staining and image classification — powerful tools in modern electron microscopy
2004
RNA-seq Profiling of Small Numbers of Drosophila Neurons
2014 StandoutNobel
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
2004 Standout
Structure of the TRPA1 ion channel suggests regulatory mechanisms
2015 StandoutNatureNobel
Perspectives in protein-fold recognition
1997
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
2002 Standout
MicroRNAs
2004 Standout
Align-m—a new algorithm for multiple alignment of highly divergent sequences
2004
The Protein Data Bank
2000 Standout
Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals
2005 Nature
Unravelling hepatitis C virus replication from genome to function
2005 StandoutNatureNobel
X-ray structure of a voltage-dependent K+ channel
2003 StandoutNatureNobel
Functional proteins from a random-sequence library
2001 StandoutNatureNobel
Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification
2004
Protein–protein interaction and quaternary structure
2008
Accurate design of co-assembling multi-component protein nanomaterials
2014 StandoutNatureNobel
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
MUSCLE: multiple sequence alignment with high accuracy and high throughput
2004 Standout
COMPASS: A Tool for Comparison of Multiple Protein Alignments with Assessment of Statistical Significance
2003
Minigenes Impart Odorant Receptor-Specific Axon Guidance in the Olfactory Bulb
2002
The Vienna RNA Websuite
2008 Standout
Identification of genes expressed in C. elegans touch receptor neurons
2002 StandoutNatureNobel
The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA
2016 StandoutNatureNobel
Rational design of α-helical tandem repeat proteins with closed architectures
2015 StandoutNatureNobel
Large-scale comparison of protein sequence alignment algorithms with structure alignments
2000
A Segmentation/Clustering Model for the Analysis of Array CGH Data
2007
Kemp elimination catalysts by computational enzyme design
2008 StandoutNatureNobel
I- Ppo I and I- Cre I homing site sequence degeneracy determined by random mutagenesis and sequential in vitro enrichment 1 1Edited by G. Smith
1998
Computational redesign of endonuclease DNA binding and cleavage specificity
2006 StandoutNatureNobel
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
Prediction of protein structure by emphasizing local side-chain/backbone interactions in ensembles of turn fragments
2003
Successful ab initio prediction of the tertiary structure of NK‐lysin using multiple sequences and recognized supersecondary structural motifs
1997
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
1997 Standout
A synthetic homing endonuclease-based gene drive system in the human malaria mosquito
2011 StandoutNatureNobel
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
1994 Standout
Position-based sequence weights
1994
Structure of the zinc-binding domain of an essential component of the hepatitis C virus replicase
2005 StandoutNatureNobel
DNA-PKcs has KU-dependent function in rRNA processing and haematopoiesis
2020 StandoutNatureNobel
Using substitution probabilities to improve position-specific scoring matrices
1996
[22] Using CLUSTAL for multiple sequence alignments
1996
The Limit of Accuracy of Protein Modeling: Influence of Crystal Packing on Protein Structure
2005
The NS5A Protein of Hepatitis C Virus Is a Zinc Metalloprotein
2004 StandoutNobel
X-ray structure of a ClC chloride channel at 3.0 Å reveals the molecular basis of anion selectivity
2002 StandoutNatureNobel
CAFASP‐1: Critical assessment of fully automated structure prediction methods
1999
Exploring the repeat protein universe through computational protein design
2015 StandoutNatureNobel
T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. Thornton
2000 Standout
The Transcriptional Coactivators p300 and CBP Are Histone Acetyltransferases
1996 Standout
Molecular evolution of FOXP2, a gene involved in speech and language
2002 StandoutNatureNobel
Energy Functions that Discriminate X-ray and Near-native Folds from Well-constructed Decoys
1996 StandoutNobel
Mice cloned from olfactory sensory neurons
2004 StandoutNatureNobel
Analysis of one million base pairs of Neanderthal DNA
2006 StandoutNatureNobel
The Orc4p and Orc5p Subunits of the Xenopus and Human Origin Recognition Complex Are Related to Orc1p and Cdc6p
1998 StandoutNobel
The α/β fold uracil DNA glycosylases: a common origin with diverse fates
2000
The evolution of gene expression levels in mammalian organs
2011 StandoutNatureNobel
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1997 Standout
Hidden Markov models of biological primary sequence information.
1994 StandoutNobel
Accurate design of megadalton-scale two-component icosahedral protein complexes
2016 StandoutScienceNobel
Characterization of Proton-Transfer Catalysis by Serum Albumins
2000
A web site for the computational analysis of yeast regulatory sequences
2000
Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks.
1994
VARNA: Interactive drawing and editing of the RNA secondary structure
2009
Experimental Determination of the Absolute Enantioselectivity of an Antibody-Catalyzed Diels−Alder Reaction and Theoretical Explorations of the Origins of Stereoselectivity
2003
Structure-based prediction of DNA target sites by regulatory proteins
1999
A map of the protein space--an automatic hierarchical classification of all protein sequences.
1998
Recent progress in multiple sequence alignment: a survey
2002
Design of a Novel Globular Protein Fold with Atomic-Level Accuracy
2003 StandoutScienceNobel
Fast and accurate short read alignment with Burrows–Wheeler transform
2009 Standout
Progress in Modeling of Protein Structures and Interactions
2005 StandoutScienceNobel
Comparative Protein Structure Modeling of Genes and Genomes
2000 Standout
Fitting a mixture model by expectation maximization to discover motifs in biopolymers.
1994 Standout
Protein Structure Prediction and Structural Genomics
2001 StandoutScienceNobel
Statistics of local complexity in amino acid sequences and sequence databases
1993
Human DNA Repair Genes
2001 StandoutScienceNobel
CAFASP-1: Critical assessment of fully automated structure prediction methods
1999
Structural Basis of Transcription: RNA Polymerase II at 2.8 Ångstrom Resolution
2001 StandoutScienceNobel
Circadian neuron feedback controls the Drosophila sleep–activity profile
2016 StandoutNatureNobel
Works of Charles E. Lawrence being referenced
An empirical energy function for threading protein sequence through the folding motif
1993
Genome-wide analysis of A-to-I RNA editing by single-molecule sequencing in Drosophila
2013
The frequency of ion‐pair substructures in proteins is quantitatively related to electrostatic potential: A statistical model for nonbonded interactions
1991
Bayesian adaptive sequence alignment algorithms.
1998
A Bayesian method for classification of images from electron micrographs
2002
Extent and nature of contacts between protein molecules in crystal lattices and between subunits of protein oligomers
1997
An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences
1990
Human-mouse genome comparisons to locate regulatory sites
2000
Gibbs motif sampling: Detection of bacterial outer membrane protein repeats
1995
Sfold web server for statistical folding and rational design of nucleic acids
2004
RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble
2005
Algorithms for the optimal identification of segment neighborhoods
1989
The td intron endonuclease I-TevI makes extensive sequence-tolerant contacts across the minor groove of its DNA target.
1993
Detecting Subtle Sequence Signals: a Gibbs Sampling Strategy for Multiple Alignment
1993 Science
Extracting protein alignment models from the sequence database
1997