Citation Impact
Citing Papers
Functional metagenomic discovery of bacterial effectors in the human microbiome and isolation of commendamide, a GPCR G2A/132 agonist
2015
A noninflammatory mRNA vaccine for treatment of experimental autoimmune encephalomyelitis
2021 StandoutScienceNobel
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
2015 Standout
Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes
2017
BioBERT: a pre-trained biomedical language representation model for biomedical text mining
2019 Standout
The MR-Base platform supports systematic causal inference across the human phenome
2018 Standout
The UK Biobank resource with deep phenotyping and genomic data
2018 StandoutNature
Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
2016
The Ensembl Variant Effect Predictor
2016 Standout
The cell line ontology-based representation, integration and analysis of cell lines used in China
2019
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
2019 Standout
Phevor Combines Multiple Biomedical Ontologies for Accurate Identification of Disease-Causing Alleles in Single Individuals and Small Nuclear Families
2014
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
2021 Standout
NCBI disease corpus: A resource for disease name recognition and concept normalization
2014
Data analysis for 16S microbial profiling from different benchtop sequencing platforms
2014
Baseline survey of the anatomical microbial ecology of an important food plant: Solanum lycopersicum (tomato)
2013
DISEASES: Text mining and data integration of disease–gene associations
2014
Sequential transcriptional changes dictate safe and effective antigen-specific immunotherapy
2014
An Expanded View of Complex Traits: From Polygenic to Omnigenic
2017 Standout
IMP 2.0: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks
2015
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
2016 Standout
FunGene: the functional gene pipeline and repository
2013
Genetic effects on gene expression across human tissues
2017 StandoutNature
A comprehensive map of molecular drug targets
2016 Standout
Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota
2018 Standout
DrugCentral: online drug compendium
2016
Trends in GPCR drug discovery: new agents, targets and indications
2017 Standout
Analysis of plant microbe interactions in the era of next generation sequencing technologies
2014
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease
2015
The landscape of long noncoding RNAs in the human transcriptome
2015 Standout
Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease
2016 Standout
OMIM.org: Online Mendelian Inheritance in Man (OMIM®), an online catalog of human genes and genetic disorders
2014 Standout
Document-level attention-based BiLSTM-CRF incorporating disease dictionary for disease named entity recognition
2019
GWASdb v2: an update database for human genetic variants identified by genome-wide association studies
2015
FlyBase at 25: looking to the future
2016
The IUPHAR/BPS Guide to PHARMACOLOGY in 2016: towards curated quantitative interactions between 1300 protein targets and 6000 ligands
2015
Microbial interactions: from networks to models
2012 Standout
The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
2013 Standout
Towards a complete map of the human long non-coding RNA transcriptome
2018
Functional mapping and annotation of genetic associations with FUMA
2017 Standout
Lag-3, Tim-3, and TIGIT: Co-inhibitory Receptors with Specialized Functions in Immune Regulation
2016 Standout
Coming of age: ten years of next-generation sequencing technologies
2016 Standout
DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes
2015
The ChEMBL database in 2017
2016 Standout
Advancing analytical algorithms and pipelines for billions of microbial sequences
2011
10 Years of GWAS Discovery: Biology, Function, and Translation
2017 Standout
Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets
2016 Standout
Applications of machine learning in drug discovery and development
2019 Standout
Interactive Big Data Resource to Elucidate Human Immune Pathways and Diseases
2015
UniCarbKB: New database features for integrating glycan structure abundance, compositional glycoproteomics data, and disease associations
2016
ClinVar: public archive of interpretations of clinically relevant variants
2015 Standout
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
2013 Standout
Ribosomal Database Project: data and tools for high throughput rRNA analysis
2013 Standout
Distinct Polysaccharide Utilization Determines Interspecies Competition between Intestinal Prevotella spp.
2020 StandoutNobel
Gene regulation by long non-coding RNAs and its biological functions
2020 Standout
The immune epitope database (IEDB) 3.0
2014 Standout
Gut microbiota in human metabolic health and disease
2020 Standout
The IUPHAR/BPS Guide to PHARMACOLOGY in 2018: updates and expansion to encompass the new guide to IMMUNOPHARMACOLOGY
2017 Standout
The jPOST environment: an integrated proteomics data repository and database
2018
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
2015 Standout
Pivoting the Plant Immune System from Dissection to Deployment
2013 StandoutScience
Sex-Specific Effects of Organophosphate Diazinon on the Gut Microbiome and Its Metabolic Functions
2016
Viruses.STRING: A Virus-Host Protein-Protein Interaction Database
2018
Immuno-Navigator, a batch-corrected coexpression database, reveals cell type-specific gene networks in the immune system
2016 StandoutNobel
The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences
2021 Standout
The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes
2015 Standout
An intelligent healthcare monitoring framework using wearable sensors and social networking data
2020 Standout
Structure, variation, and assembly of the root-associated microbiomes of rice
2015 Standout
g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)
2019 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
PubChem 2019 update: improved access to chemical data
2018 Standout
The DisGeNET knowledge platform for disease genomics: 2019 update
2019 Standout
IID 2018 update: context-specific physical protein–protein interactions in human, model organisms and domesticated species
2018
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
DOSE: an R/Bioconductor package for disease ontology semantic and enrichment analysis
2014
Structure and Functions of the Bacterial Microbiota of Plants
2013 Standout
Human Disease Ontology 2018 update: classification, content and workflow expansion
2018
Chemical Glycoproteomics
2016 StandoutNobel
Works of Cesar Arze being referenced
Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data
2014
CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing
2011
Disease Ontology: a backbone for disease semantic integration
2011