Citation Impact
Citing Papers
BonDNet: a graph neural network for the prediction of bond dissociation energies for charged molecules
2020
Improvement of comparative model accuracy by free-energy optimization along principal components of natural structural variation
2004 StandoutNobel
Protein interaction networks revealed by proteome coevolution
2019 StandoutScienceNobel
Conserved patterns of protein interaction in multiple species
2005
FLASH: fast length adjustment of short reads to improve genome assemblies
2011 Standout
Microarrays of small molecules embedded in biodegradable polymers for use in mammalian cell-based screens
2004
Ferroptosis regulation by the NGLY1/NFE2L1 pathway
2022 StandoutNobel
Computational Stabilization of a Non‐Heme Iron Enzyme Enables Efficient Evolution of New Function
2024 StandoutNobel
A domain-based approach to predict protein-protein interactions
2007
Expansive discovery of chemically diverse structured macrocyclic oligoamides
2024 StandoutScienceNobel
Differential network biology
2012
In silico prediction of protein-protein interactions in human macrophages
2014 Standout
Network‐based prediction of protein function
2007
An integrated approach to the prediction of domain-domain interactions
2006
Soft corrugated channel with synergistic exclusive discrimination gating for CO2 recognition in gas mixture
2023 StandoutNobel
Osteoporosis
2019 Standout
The Concept of Synthetic Lethality in the Context of Anticancer Therapy
2005 StandoutNobel
Ferroptosis: Death by Lipid Peroxidation
2015 Standout
Ferroptosis as a p53-mediated activity during tumour suppression
2015 StandoutNature
Protein Complexes in Bacteria
2015
Phenotypic connections in surprising places
2010
Protein structure similarity clustering (PSSC) and natural product structure as inspiration sources for drug development and chemical genomics
2005
Novel technologies for virtual screening
2004
Gene expression–based high-throughput screening(GE-HTS) and application to leukemia differentiation
2004
Ferroptosis turns 10: Emerging mechanisms, physiological functions, and therapeutic applications
2022 Standout
ChEMBL: a large-scale bioactivity database for drug discovery
2011 Standout
PubChem3D: Diversity of shape
2011
Cell-Based Assays for High-Throughput Screening
2010
Modeling cellular machinery through biological network comparison
2006
Automatic detection of subsystem/pathway variants in genome analysis
2005
RAS–RAF–MEK-dependent oxidative cell death involving voltage-dependent anion channels
2007 Nature
BioGRID: a general repository for interaction datasets
2005 Standout
Pyrrolidinyl‐Spirooxindole Natural Products as Inspirations for the Development of Potential Therapeutic Agents
2007 Standout
PubChem3D: Biologically relevant 3-D similarity
2011
Engineering an allosteric transcription factor to respond to new ligands
2015 StandoutNobel
ElectroShape: fast molecular similarity calculations incorporating shape, chirality and electrostatics
2010
Local Network Topology in Human Protein Interaction Data Predicts Functional Association
2009
Mitochondria: In Sickness and in Health
2012 Standout
Edge‐count probabilities for the identification of local protein communities and their organization
2005
The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes
2005 Standout
Primary breast cancer: ESMO Clinical Practice Guidelines for diagnosis, treatment and follow-up
2010 Standout
Protein aggregation and neurodegenerative disease
2004 Standout
Regulation of Ferroptotic Cancer Cell Death by GPX4
2014 Standout
The Perseus computational platform for comprehensive analysis of (prote)omics data
2016 Standout
Ferroptosis: An Iron-Dependent Form of Nonapoptotic Cell Death
2012 Standout
Paracrine Induction of HIF by Glutamate in Breast Cancer: EglN1 Senses Cysteine
2016 StandoutNobel
Effective Identification of Conserved Pathways in Biological Networks Using Hidden Markov Models
2009
PubChem Substance and Compound databases
2015 Standout
Global mapping of pharmacological space
2006
A Rapid Cellular FRET Assay of Polyglutamine Aggregation Identifies a Novel Inhibitor
2003
Probing Teichoic Acid Genetics with Bioactive Molecules Reveals New Interactions among Diverse Processes in Bacterial Cell Wall Biogenesis
2009
PubChem structure–activity relationship (SAR) clusters
2015
Towards zoomable multidimensional maps of the cell
2007
ChemBank: a small-molecule screening and cheminformatics resource database
2007
PubChem3D: Similar conformers
2011
Spinal Muscular Atrophy: From Gene to Therapy
2006
The PtdIns(3,4)P2 phosphatase INPP4A is a suppressor of excitotoxic neuronal death
2010 StandoutNatureNobel
Early breast cancer: ESMO Clinical Practice Guidelines for diagnosis, treatment and follow-up
2019 Standout
Molecular Recognition in Chemical and Biological Systems
2015
Organic reactivity from mechanism to machine learning
2021
The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
2014 Standout
MicroRNA expression profiles classify human cancers
2005 StandoutNatureNobel
Reactants, products, and transition states of elementary chemical reactions based on quantum chemistry
2020
PubChem3D: a new resource for scientists
2011
The CoQ oxidoreductase FSP1 acts parallel to GPX4 to inhibit ferroptosis
2019 StandoutNature
Ferroptosis: mechanisms, biology and role in disease
2021 Standout
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
Cdk5 Regulates the Phosphorylation of Tyrosine 1472 NR2B and the Surface Expression of NMDA Receptors
2008
STRING 8--a global view on proteins and their functional interactions in 630 organisms
2008 Standout
Antibacterial drug discovery in the resistance era
2016 StandoutNature
Unveiling the role of network and systems biology in drug discovery
2010
Complex network measures of brain connectivity: Uses and interpretations
2009 Standout
Click Chemistry for Drug Development and Diverse Chemical–Biology Applications
2013 Standout
MECHANISMS IN ENDOCRINOLOGY: Genetics of human bone formation
2017
Pushing the frontiers of density functionals by solving the fractional electron problem
2021 StandoutScienceNobel
Identifying functional modules in protein–protein interaction networks: an integrated exact approach
2008
Chemical Genetics
2006
Peroxidation of polyunsaturated fatty acids by lipoxygenases drives ferroptosis
2016 Standout
Community detection in graphs
2009 Standout
Improving Compound Activity Classification via Deep Transfer and Representation Learning
2022
Opportunities and Challenges for Machine Learning-Assisted Enzyme Engineering
2024 Nobel
Prediction of protein function and pathways in the genome era
2004
Catalytic Asymmetric Hydroalkoxylation of C–C Multiple Bonds
2021 StandoutNobel
SwissTargetPrediction: updated data and new features for efficient prediction of protein targets of small molecules
2019 Standout
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
PubChem 2023 update
2022 Standout
Conformer Generation with OMEGA: Learning from the Data Set and the Analysis of Failures
2012
Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum
2011 StandoutScience
Ferroptosis as a target for protection against cardiomyopathy
2019 Standout
Diversity Oriented Clicking (DOC): Divergent Synthesis of SuFExable Pharmacophores from 2‐Substituted‐Alkynyl‐1‐Sulfonyl Fluoride (SASF) Hubs
2020 StandoutNobel
Impact of Natural Products on Developing New Anti-Cancer Agents
2009 Standout
The Fluorescent Toolbox for Assessing Protein Location and Function
2006 StandoutScienceNobel
A Distributional Model of Bound Ligand Conformational Strain: From Small Molecules up to Large Peptidic Macrocycles
2023
Conformational Strain of Macrocyclic Peptides in Ligand–Receptor Complexes Based on Advanced Refinement of Bound-State Conformers
2021
Next generation diversity-oriented synthesis: a paradigm shift from chemical diversity to biological diversity
2018
Causal Protein-Signaling Networks Derived from Multiparameter Single-Cell Data
2005 Science
Cross-species analysis of biological networks by Bayesian alignment
2006
Works of Brian Kelley being referenced
Biological Mechanism Profiling Using an Annotated Compound Library
2003
Improved ligand geometries in crystallographic refinement usingAFITTinPHENIX
2016
A Systematic Review of Complications of Implant-based Breast Reconstruction with Prereconstruction and Postreconstruction Radiotherapy
2013
A Flexible Data Analysis Tool for Chemical Genetic Screens
2004
A Systematic Review of Morbidity Associated with Autologous Breast Reconstruction Before and After Exposure to Radiotherapy: Are Current Practices Ideal?
2014
Detecting Spatial Patterns in Biological Array Experiments
2003
Molecular Shape and Medicinal Chemistry: A Perspective
2010
PathBLAST: a tool for alignment of protein interaction networks
2004
Indoprofen Upregulates the Survival Motor Neuron Protein through a Cyclooxygenase-Independent Mechanism
2004
Essential considerations for using protein–ligand structures in drug discovery
2012
Identification of Protein Complexes by Comparative Analysis of Yeast and Bacterial Protein Interaction Data
2005
Mutations in FKBP10 cause recessive osteogenesis imperfecta and bruck syndrome
2010
Global analysis of large-scale chemical and biological experiments.
2002
Analyzing Learned Molecular Representations for Property Prediction
2019
Conserved pathways within bacteria and yeast as revealed by global protein network alignment
2003
Analysis of Large Screening Data Sets via Adaptively Grown Phylogenetic-Like Trees
2002