Standout Papers
- De novo design of protein homodimers containing tunable symmetric protein pockets (2022)
- Target-conditioned diffusion generates potent TNFR superfamily antagonists and agonists (2024)
- Improving de novo protein binder design with deep learning (2023)
- Protein sequence optimization with a pairwise decomposable penalty for buried unsatisfied hydrogen bonds (2021)
- De novo design of picomolar SARS-CoV-2 miniprotein inhibitors (2020)
- De novo design of luciferases using deep learning (2023)
- Accurate de novo design of heterochiral protein–protein interactions (2024)
- Perturbing the energy landscape for improved packing during computational protein design (2020)
Citation Impact
Citing Papers
Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock
2023 StandoutNobel
Generation of ordered protein assemblies using rigid three-body fusion
2021 StandoutNobel
Chimeric spike mRNA vaccines protect against Sarbecovirus challenge in mice
2021 StandoutScienceNobel
Exploiting conformational dynamics to modulate the function of designed proteins
2023 StandoutNobel
Hallucinating symmetric protein assemblies
2022 StandoutScienceNobel
A fragment-based protein interface design algorithm for symmetric assemblies
2021
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN
2024 StandoutNobel
Sculpting conducting nanopore size and shape through de novo protein design
2024 StandoutScienceNobel
Computational Stabilization of a Non‐Heme Iron Enzyme Enables Efficient Evolution of New Function
2024 StandoutNobel
Formation, chemical evolution and solidification of the dense liquid phase of calcium (bi)carbonate
2024 StandoutNobel
Four-component protein nanocages designed by programmed symmetry breaking
2024 StandoutNatureNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
De novo design of modular and tunable protein biosensors
2021 StandoutNatureNobel
Computational design of soluble and functional membrane protein analogues
2024 StandoutNatureNobel
A suite of designed protein cages using machine learning and protein fragment-based protocols
2024
De novo design of allosterically switchable protein assemblies
2024 StandoutNatureNobel
Precisely patterned nanofibres made from extendable protein multiplexes
2023 StandoutNobel
Engineered receptors for soluble cellular communication and disease sensing
2024 StandoutNatureNobel
De Novo Design of a Highly Stable Ovoid TIM Barrel: Unlocking Pocket Shape towards Functional Design
2022
Computationally designed sensors detect endogenous Ras activity and signaling effectors at subcellular resolution
2024 StandoutNobel
De novo design of obligate ABC-type heterotrimeric proteins
2022 StandoutNobel
Sampling of structure and sequence space of small protein folds
2022 StandoutNobel
Directing polymorph specific calcium carbonate formation with de novo protein templates
2023 StandoutNobel
Machine learning for functional protein design
2024
Protein interactions in human pathogens revealed through deep learning
2024 StandoutNobel
Mechanisms of SARS-CoV-2 entry into cells
2021 Standout
Multistate and functional protein design using RoseTTAFold sequence space diffusion
2024 StandoutNobel
Structural basis for broad coronavirus neutralization
2021
Transient water wires mediate selective proton transport in designed channel proteins
2023
Opportunities and challenges in design and optimization of protein function
2024
Protein Design Using Structure-Prediction Networks: AlphaFold and RoseTTAFold as Protein Structure Foundation Models
2024
A Brief History of De Novo Protein Design: Minimal, Rational, and Computational
2021
Design of multi-scale protein complexes by hierarchical building block fusion
2021 StandoutNobel
MutDock: A computational docking approach for fixed-backbone protein scaffold design
2022
Design of amyloidogenic peptide traps
2024 StandoutNobel
De novo design of buttressed loops for sculpting protein functions
2024 StandoutNobel
A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent
2021
Sparks of function by de novo protein design
2024
Exploration of Structured Symmetric Cyclic Peptides as Ligands for Metal-Organic Frameworks
2022 StandoutNobel
De novo designed protein inhibitors of amyloid aggregation and seeding
2022
De novo design of modular protein hydrogels with programmable intra- and extracellular viscoelasticity
2024 StandoutNobel
Opportunities and Challenges for Machine Learning-Assisted Enzyme Engineering
2024 Nobel
Peptide-binding specificity prediction using fine-tuned protein structure prediction networks
2023 StandoutNobel
Rapid and Sensitive Detection of Antigen from SARS-CoV-2 Variants of Concern by a Multivalent Minibinder-Functionalized Nanomechanical Sensor
2022 StandoutNobel
De novo protein fold design through sequence-independent fragment assembly simulations
2023
Computational design of mechanically coupled axle-rotor protein assemblies
2022 StandoutScienceNobel
De novo design of small beta barrel proteins
2023 StandoutNobel
The Protein Structure Prediction Revolution and Its Implications for Medicine
2023 StandoutNobel
Reshaping de Novo Protein Switches into Bioresponsive Materials for Biomarker, Toxin, and Viral Detection
2022 StandoutNobel
Top-down design of protein architectures with reinforcement learning
2023 StandoutScienceNobel
Design of Heme Enzymes with a Tunable Substrate Binding Pocket Adjacent to an Open Metal Coordination Site
2023 StandoutNobel
Reconfigurable asymmetric protein assemblies through implicit negative design
2022 StandoutScienceNobel
Works of Brian Coventry being referenced
Perturbing the energy landscape for improved packing during computational protein design
2020 StandoutNobel
De novo design of picomolar SARS-CoV-2 miniprotein inhibitors
2020 StandoutScienceNobel
Improving de novo protein binder design with deep learning
2023 StandoutNobel
De novo design of luciferases using deep learning
2023 StandoutNatureNobel
Protein sequence optimization with a pairwise decomposable penalty for buried unsatisfied hydrogen bonds
2021 StandoutNobel
Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins
2023 Nobel
De novo design of protein homodimers containing tunable symmetric protein pockets
2022 StandoutNobel