Citation Impact

Citing Papers

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
2010 Standout
Vaginal microbiome of reproductive-age women
2010 Standout
The biomass distribution on Earth
2018 Standout
The diversity and biogeography of soil bacterial communities
2006 Standout
Viruses in the Oceanic Basement
2017
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
2005 Standout
Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
2013 Standout
Diversity of the Human Intestinal Microbial Flora
2005 StandoutScience
Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
2013 Standout
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
2007 Standout
Obesity alters gut microbial ecology
2005 Standout
Novel microbial assemblages inhabiting crustal fluids within mid-ocean ridge flank subsurface basalt
2016
The evolutionary history of Symbiodinium and scleractinian hosts—Symbiosis, diversity, and the effect of climate change
2006
A core gut microbiome in obese and lean twins
2008 StandoutNature
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments
2012
Specificity and sensitivity of eubacterial primers utilized for molecular profiling of bacteria within complex microbial ecosystems
2007
Group‐specific primer and probe sets to detect methanogenic communities using quantitative real‐time polymerase chain reaction
2005 Standout
A natural species concept for prokaryotes
1998
16S‐23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium‐oxidizing bacteria: implications for phylogeny and in situ detection
2001
Human Genetics Shape the Gut Microbiome
2014 Standout
Combinatorial and computational challenges for biocatalyst design
2001 StandoutNatureNobel
Nitrite concentration influences the population structure of Nitrospira ‐like bacteria
2006
Association of Atopobium vaginae, a recently described metronidazole resistant anaerobe, with bacterial vaginosis
2004
Viruses in the sea
2005 StandoutNature
Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology
2000
Ecology of prokaryotic viruses
2003 Standout
The ecology and biotechnology of sulphate-reducing bacteria
2008 Standout
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
Revealing the unexplored fungal communities in deep groundwater of crystalline bedrock fracture zones in Olkiluoto, Finland
2015
The species concept for prokaryotes
2001 Standout
Secretor Genotype (FUT2 gene) Is Strongly Associated with the Composition of Bifidobacteria in the Human Intestine
2011
The Science of Antibiotic Discovery
2020 Standout
Necrotizing Enterocolitis
2011 Standout
Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults
2009
The Impact of the Gut Microbiota on Human Health: An Integrative View
2012 Standout
Microbial life under extreme energy limitation
2013
RNA-guided genetic silencing systems in bacteria and archaea
2012 StandoutNatureNobel
Diet rapidly and reproducibly alters the human gut microbiome
2013 StandoutNature
The quantitative significance of Syntrophaceae and syntrophic partnerships in methanogenic degradation of crude oil alkanes
2011
Effects of Microbial Community Diversity on the Survival of Pseudomonas aeruginosa in the Wheat Rhizosphere
2005
daime , a novel image analysis program for microbial ecology and biofilm research
2005
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
2012 Standout
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
2013 StandoutNature
Bacteria–phage coevolution as a driver of ecological and evolutionary processes in microbial communities
2014
Carriage, quantification, and predominance of methanogens and sulfate-reducing bacteria in faecal samples
2006
ARB: a software environment for sequence data
2004 Standout
Anaerobic ammonium oxidation by anammox bacteria in the Black Sea
2003 StandoutNature
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
2006 Standout
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
2013 Standout
Effects of naphthalene on microbial community composition in the Delaware estuary
2006
Microbial Diversity in a Hypersaline Sulfate Lake: A Terrestrial Analog of Ancient Mars
2017 StandoutNobel
Archaea predominate among ammonia-oxidizing prokaryotes in soils
2006 StandoutNature
Enumeration of 16S rDNA of Desulfotomaculum lineage 1 in rice field soil by real-time PCR with SybrGreen™ detection
2002
Next-generation approaches to the microbial ecology of food fermentations
2012
The Biology of CRISPR-Cas: Backward and Forward
2018 StandoutNobel
Development of the Intestinal Bacterial Composition in Hospitalized Preterm Infants in Comparison with Breast-Fed, Full-Term Infants
2003
Novel lineages of Planctomycetes densely colonize the alkaline gut of soil‐feeding termites ( Cubitermes spp.)
2008
Feast and famine — microbial life in the deep-sea bed
2007
An evaluation of terminal‐restriction fragment length polymorphism (T‐RFLP) analysis for the study of microbial community structure and dynamics
2000
Duodenal Infusion of Donor Feces for Recurrent Clostridium difficile
2013 Standout
Impacts of biodiversity on the emergence and transmission of infectious diseases
2010 StandoutNature
Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation
2010 Standout
Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations
2013
Search and Discovery Strategies for Biotechnology: the Paradigm Shift
2000
Microbial community structure and global trace gases
1998
Temperature Gradient Gel Electrophoresis Analysis of 16S rRNA from Human Fecal Samples Reveals Stable and Host-Specific Communities of Active Bacteria
1998 Standout
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
2012 Standout
Microbial diversity and soil functions
2017
Impact of Fumigants on Soil Microbial Communities
2001
Host-Bacterial Mutualism in the Human Intestine
2005 StandoutScience
Microbial diversity and soil functions
2003
Shifting the genomic gold standard for the prokaryotic species definition
2009 Standout
The Host Genotype Affects the Bacterial Community in the Human Gastronintestinal Tract
2001
Shifts in the dominant populations of ammonia-oxidizing b-subclass Proteobacteria along the eutrophic Schelde estuary
2001
Use of the T-RFLP technique to assess spatial and temporal changes in the bacterial community structure within an agricultural soil planted with transgenic and non-transgenic potato plants
2000
Coral Reefs Under Rapid Climate Change and Ocean Acidification
2007 StandoutScience
A review of prokaryotic populations and processes in sub-seafloor sediments, including biosphere:geosphere interactions
2014
Genetic diversity and expression of the [NiFe] hydrogenase large-subunit gene of Desulfovibrio spp. in environmental samples
1997
Structure, variation, and assembly of the root-associated microbiomes of rice
2015 Standout
Metagenomics of the Human Body
2010
PCR primers to amplify 16S rRNA genes from cyanobacteria
1997 Standout
Mucosa-Associated Bacteria in the Human Gastrointestinal Tract Are Uniformly Distributed along the Colon and Differ from the Community Recovered from Feces
2002
Towards a better quantitative assessment of the relevance of deep-sea viruses, Bacteria and Archaea in the functioning of the ocean seafloor
2015
Microbial diversity within basement fluids of the sediment-buried Juan de Fuca Ridge flank
2012
Genomic insights that advance the species definition for prokaryotes
2005 Standout
Life under extreme energy limitation: a synthesis of laboratory- and field-based investigations
2015
Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium
2004 Standout
Towards the human intestinal microbiota phylogenetic core
2009
Rapid Method for Coextraction of DNA and RNA from Natural Environments for Analysis of Ribosomal DNA- and rRNA-Based Microbial Community Composition
2000
Phylogenetically Novel Uncultured Microbial Cells Dominate Earth Microbiomes
2018
Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis
1997 Standout
Resistance, resilience, and redundancy in microbial communities
2008 Standout
Culture-Independent Analyses of Temporal Variation of the Dominant Fecal Microbiota and Targeted Bacterial Subgroups in Crohn's Disease
2006
Desulfotomaculum thermobenzoicum subsp. thermosyntrophicum subsp. nov., a thermophilic, syntrophic, propionate-oxidizing, spore-forming bacterium.
2002
A Review of Molecular Methods for Microbial Community Profiling of Beer and Wine
2012
Intragenomic Heterogeneity of 16S rRNA Genes Causes Overestimation of Prokaryotic Diversity
2013
The Long-Term Stability of the Human Gut Microbiota
2013 StandoutScience
A molecular view of the intestinal ecosystem.
2000
A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane
2013 Standout
Meta-Analysis of Quantification Methods Shows that Archaea and Bacteria Have Similar Abundances in the Subseafloor
2013
Caloramator coolhaasii sp. nov., a glutamate-degrading, moderately thermophilic anaerobe.
2000
Investigations into the influence of host genetics on the predominant eubacteria in the faecal microflora of children
2005

Works of Bert Engelen being referenced

A laboratory experiment of intact polar lipid degradation in sandy sediments
2011
High virus-to-cell ratios indicate ongoing production of viruses in deep subsurface sediments
2014
Induction of prophages from deep‐subseafloor bacteria
2011
Methane and sulfate profiles within the subsurface of a tidal flat are reflected by the distribution of sulfate-reducing bacteria and methanogenic archaea
2006
Effect of petrochemical sludge concentrations on microbial communities during soil bioremediation
2005
Quantitative analysis of bacterial communities from Mediterranean sapropels based on cultivation-dependent methods
2004
Acetogens and Acetoclastic Methanosarcinales Govern Methane Formation in Abandoned Coal Mines
2011
Two Distinct Photobacterium Populations Thrive in Ancient Mediterranean Sapropels
2007
Widespread distribution and high abundance of Rhizobium radiobacter within Mediterranean subsurface sediments
2006
Fluids from the Oceanic Crust Support Microbial Activities within the Deep Biosphere
2008
Monitoring Impact of a Pesticide Treatment on Bacterial Soil Communities by Metabolic and Genetic Fingerprinting in Addition to Conventional Testing Procedures
1998
Role ofBacteria,ArchaeaandFungiinvolved in Methane Release in Abandoned Coal Mines
2011
Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis
1996
Statistical comparisons of community catabolic profiles
1997
Biogeography of Rhizobium radiobacter and distribution of associated temperate phages in deep subseafloor sediments
2012
Direct ribosome isolation from soil to extract bacterial rRNA for community analysis
1996
Trends in Basalt and Sediment Core Contamination During IODP Expedition 301
2006
Microbial Diversity in Coastal Subsurface Sediments: a Cultivation Approach Using Various Electron Acceptors and Substrate Gradients
2005
Phylogenetic and Physiological Diversity of Cultured Deep-Biosphere Bacteria from Equatorial Pacific Ocean and Peru Margin Sediments
2007
Microbial Community in Black Rust Exposed to Hot Ridge Flank Crustal Fluids
2006
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