Citation Impact
Citing Papers
Machine learning-assisted directed protein evolution with combinatorial libraries
2019 Nobel
Principles for designing proteins with cavities formed by curved β sheets
2017 StandoutScienceNobel
Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism
2011
De novo design of transmembrane β barrels
2021 StandoutScienceNobel
Improved de novo structure prediction in CASP 11 by incorporating coevolution information into Rosetta
2015 StandoutNobel
A bacterium that degrades and assimilates poly(ethylene terephthalate)
2016 StandoutScience
Biotite: a unifying open source computational biology framework in Python
2018
Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23
2016
Fast and accurate protein structure search with Foldseek
2023 Standout
Multistate and functional protein design using RoseTTAFold sequence space diffusion
2024 StandoutNobel
Local Structural Differences in Homologous Proteins: Specificities in Different SCOP Classes
2012
Thioredoxin-dependent regulation of photosynthetic glyceraldehyde-3-phosphate dehydrogenase: autonomous vs. CP12-dependent mechanisms
2006
Improved chemical shift based fragment selection for CS-Rosetta using Rosetta3 fragment picker
2013 StandoutNobel
Redox regulation of the Calvin–Benson cycle: something old, something new
2013
Quality control for plant metabolomics: reporting MSI‐compliant studies
2008 Standout
The road to fully programmable protein catalysis
2022 StandoutNatureNobel
Microplastics in freshwater systems: A review on occurrence, environmental effects, and methods for microplastics detection
2017 Standout
Structure and folding of disulfide‐rich miniproteins: Insights from molecular dynamics simulations and MM‐PBSA free energy calculations
2008
Low-N protein engineering with data-efficient deep learning
2021
Mammalian display screening of diverse cystine-dense peptides for difficult to drug targets
2017 StandoutNobel
The CP12 protein family: a thioredoxin-mediated metabolic switch?
2014
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
2012 Standout
Machine learning-guided engineering of genetically encoded fluorescent calcium indicators
2024 StandoutNobel
Changes in the cell wall and cellulose content of developing cotton fibers investigated by FTIR spectroscopy
2013 Standout
The forms of alkalis in the biochar produced from crop residues at different temperatures
2010 Standout
Algorithms, Applications, and Challenges of Protein Structure Alignment
2014
Changes in the Sugarcane Metabolome with Stem Development. Are They Related to Sucrose Accumulation?
2007
Experimental assessment of the accuracy of genomic selection in sugarcane
2013
SPECIFICITY AND FUNCTION OF GLYCERALDEHYDE‐3‐PHOSPHATE DEHYDROGENASE IN A FRESHWATER DIATOM, ASTERIONELLA FORMOSA (BACILLARIOPHYCEAE)1
2008
Improving the prediction accuracy of residue solvent accessibility and real‐value backbone torsion angles of proteins by guided‐learning through a two‐layer neural network
2008
Field-resolved infrared spectroscopy of biological systems
2020 StandoutNatureNobel
Arabidopsis CP12 mutants have reduced levels of phosphoribulokinase and impaired function of the Calvin–Benson cycle
2017
Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses
2009
Template-Based Protein Modeling: Recent Methodological Advances
2010
CP12-mediated protection of Calvin–Benson cycle enzymes from oxidative stress
2013
De novo protein design by deep network hallucination
2021 StandoutNatureNobel
Evolutionary Development of Redox Regulation in Chloroplasts
2014
Fingerprinting food: current technologies for the detection of food adulteration and contamination
2012 Standout
Crystal structure of a feruloyl esterase belonging to the tannase family: A disulfide bond near a catalytic triad
2014
On the Universe of Protein Folds
2013 StandoutNobel
CLePAPS: FAST PAIR ALIGNMENT OF PROTEIN STRUCTURES BASED ON CONFORMATIONAL LETTERS
2008
β‐Bulges: Extensive structural analyses of β‐sheets irregularities
2013
Improving Protein Expression, Stability, and Function with ProteinMPNN
2024 StandoutNobel
SignalP 6.0 predicts all five types of signal peptides using protein language models
2022 Standout
FT-IR study of the changes in carbohydrate chemistry of three New Jersey pine barrens leaf litters during simulated control burning
2008
Feeding the world: improving photosynthetic efficiency for sustainable crop production
2019 Standout
Machine-Directed Evolution of an Imine Reductase for Activity and Stereoselectivity
2021
Catalytic Asymmetric Hydroalkoxylation of C–C Multiple Bonds
2021 StandoutNobel
Use of Infrared Microspectroscopy in Plant Growth and Development
2005
Glucose and Fructose Hydrates in Aqueous Solution by IR Spectroscopy
2007
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
Molecular Docking: Shifting Paradigms in Drug Discovery
2019 Standout
Mid-Infrared Spectroscopy Coupled with Chemometrics: A Tool for the Analysis of Intact Food Systems and the Exploration of Their Molecular Structure−Quality Relationships − A Review
2010
Infrared Spectroscopy
1998
Cytosolic expression, solution structures, and molecular dynamics simulation of genetically encodable disulfide‐rich de novo designed peptides
2018 StandoutNobel
Characteristics of seismic activity of the Upper Silesian Coal Basin in Poland
2006 Standout
The Crucial Role of Methodology Development in Directed Evolution of Selective Enzymes
2019
Evolutionary-scale prediction of atomic-level protein structure with a language model
2023 StandoutScience
Superoxide Ion: Generation and Chemical Implications
2016 Standout
Antisense Suppression of the Small Chloroplast Protein CP12 in Tobacco Alters Carbon Partitioning and Severely Restricts Growth
2011
Mapping of a copper-binding site on the small CP12 chloroplastic protein of Chlamydomonas reinhardtii using top-down mass spectrometry and site-directed mutagenesis
2008
FOURIER TRANSFORM INFRARED VIBRATIONAL SPECTROSCOPIC IMAGING: Integrating Microscopy and Molecular Recognition
2005
HHfrag: HMM-based fragment detection using HHpred
2011
Template‐based modeling by ClusPro in CASP13 and the potential for using co‐evolutionary information in docking
2019 StandoutNobel
Drought Stress Impacts on Plants and Different Approaches to Alleviate Its Adverse Effects
2021 Standout
An intrinsically disordered protein, CP12: jack of all trades and master of the Calvin cycle
2012
Works of Bernard Offmann being referenced
Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet
2006
Assessment of the C4 phosphoenolpyruvate carboxylase gene diversity in grasses (Poaceae)
2002
Protein structure mining using a structural alphabet
2007
A substitution matrix for structural alphabet based on structural alignment of homologous proteins and its applications
2006
Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families
2008
Comparative sequence analysis of CP12, a small protein involved in the formation of a Calvin cycle complex in photosynthetic organisms
2010
Genetic dissection of a modern sugarcane cultivar (Saccharum spp.).II. Detection of QTLs for yield components
2002
Length Variations amongst Protein Domain Superfamilies and Consequences on Structure and Function
2009
Construction of a 3D model of CP12, a protein linker
2006
Protein short loop prediction in terms of a structural alphabet
2009
Analysis of loop boundaries using different local structure assignment methods
2009
A machine learning approach for reliable prediction of amino acid interactions and its application in the directed evolution of enantioselective enzymes
2018
Analycys: A database for conservation and conformation of disulphide bonds in homologous protein domains
2007
A short survey on protein blocks
2010
Native and modeled disulfide bonds in proteins: Knowledge‐based approaches toward structure prediction of disulfide‐rich polypeptides
2005
Local Protein Structures
2007
Genetic dissection of a modern sugarcane cultivar (Saccharum spp.). I. Genome mapping with AFLP markers
2001
Simultaneous Determination of Sugars by Multivariate Analysis Applied to Mid-Infrared Spectra of Biological Samples
1997
Direct Spectroscopic Sucrose Determination of Raw Sugar Cane Juices
1997
Gram-Schmidt Orthogonalization and Elimination of the Effect of Unwanted Component Spectra Applied to a Biological Mid-infrared Spectra Collection
1996