Citation Impact
Citing Papers
SuFEx-enabled, agnostic discovery of covalent inhibitors of human neutrophil elastase
2019 StandoutNobel
Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs
2022 StandoutNobel
Spatial and temporal alterations in protein structure by EGF regulate cryptic cysteine oxidation
2020
Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences
2021
Optimal Dissociation Methods Differ for N - and O -Glycopeptides
2020 StandoutNobel
fastp: an ultra-fast all-in-one FASTQ preprocessor
2018 Standout
Rapid and automated design of two-component protein nanomaterials using ProteinMPNN
2024 StandoutNobel
Prediction of Protein Structural Features from Sequence Data Based on Shannon Entropy and Kolmogorov Complexity
2015
Protein tertiary structure prediction and refinement using deep learning and Rosetta in CASP14
2021 StandoutNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
ColabFold: making protein folding accessible to all
2022 Standout
Hydrogen peroxide as a central redox signaling molecule in physiological oxidative stress: Oxidative eustress
2017 Standout
Mapping the O-Mannose Glycoproteome in Saccharomyces cerevisiae
2016
Claudin-1 required for HCV virus entry has high potential for phosphorylation and O-glycosylation
2011
Glutathionylation in the Photosynthetic Model Organism Chlamydomonas reinhardtii: A Proteomic Survey
2011
Proteomic analysis of eleven tissues in the Chinese giant salamander (Andrias davidianus)
2019
Deep Learning for Plant Stress Phenotyping: Trends and Future Perspectives
2018
A Proteome-wide, Quantitative Survey of In Vivo Ubiquitylation Sites Reveals Widespread Regulatory Roles
2011
Current status and future challenges in implementing and upscaling vertical farming systems
2021 Standout
IL-1R and MyD88 Contribute to the Absence of a Bacterial Microbiome on the Healthy Murine Cornea
2018 StandoutNobel
Immune evasion of Plasmodium falciparum by RIFIN via inhibitory receptors
2017 Nature
The Phenotyping Dilemma—The Challenges of a Diversified Phenotyping Community
2019
Exploiting and engineering hemoproteins for abiological carbene and nitrene transfer reactions
2017 StandoutNobel
TRIM25 Enhances the Antiviral Action of Zinc-Finger Antiviral Protein (ZAP)
2017 StandoutNobel
Improved Contact Predictions Using the Recognition of Protein Like Contact Patterns
2014
The presence and impact of reference bias on population genomic studies of prehistoric human populations
2019
Modeling aspects of the language of life through transfer-learning protein sequences
2019
A structure filter for the Eukaryotic Linear Motif Resource
2009
Retraction of DNA-bound type IV competence pili initiates DNA uptake during natural transformation in Vibrio cholerae
2018
Reactive oxygen species (ROS) as pleiotropic physiological signalling agents
2020 Standout
In vivo protein tyrosine nitration in Arabidopsis thaliana
2011
Site-specific glycoproteomics confirms that protein structure dictates formation of N-glycan type, core fucosylation and branching
2012
Applications of contact predictions to structural biology
2017 StandoutNobel
Chlorcyclizine Inhibits Viral Fusion of Hepatitis C Virus Entry by Directly Targeting HCV Envelope Glycoprotein 1
2020 StandoutNobel
Brown adipose tissue thermogenic adaptation requires Nrf1-mediated proteasomal activity
2018 StandoutNobel
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
Mass Spectrometric Analysis of Lysine Ubiquitylation Reveals Promiscuity at Site Level
2010
Oxidative Stress in Cancer
2020 Standout
An optimized MM/PBSA virtual screening approach applied to an HIV‐1 gp41 fusion peptide inhibitor
2011
A Biologically-validated HCV E1E2 Heterodimer Structural Model
2017
System-wide Analysis Reveals Intrinsically Disordered Proteins Are Prone to Ubiquitylation after Misfolding Stress
2013
Defining roles of specific reactive oxygen species (ROS) in cell biology and physiology
2022 Standout
Mapping Yeast N-Glycosites with Isotopically Recoded Glycans
2012 StandoutNobel
Predicting functional effect of missense variants using graph attention neural networks
2022
The Phyre2 web portal for protein modeling, prediction and analysis
2015 Standout
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry–Based Glycoproteomics
2020 StandoutNobel
Artificial intelligence in medicine
2017 Standout
Cytokeratins mediate epithelial innate defense through their antimicrobial properties
2012
Identification of discriminative gene-level and protein-level features associated with pathogenic gain-of-function and loss-of-function variants
2021
Mining museums for historical DNA: advances and challenges in museomics
2021 Standout
SuSPect: Enhanced Prediction of Single Amino Acid Variant (SAV) Phenotype Using Network Features
2014
The Expanding Landscape of the Thiol Redox Proteome
2015
IFITM3 directly engages and shuttles incoming virus particles to lysosomes
2018 StandoutNobel
CPHmodels-3.0—remote homology modeling using structure-guided sequence profiles
2010
A Membrane Burial Potential with H-Bonds and Applications to Curved Membranes and Fast Simulations
2018 StandoutNobel
2017
Redox Systems Biology: Harnessing the Sentinels of the Cysteine Redoxome
2019
Solvent Accessibility of Residues Undergoing Pathogenic Variations in Humans: From Protein Structures to Protein Sequences
2021
Glycoproteomics
2022 StandoutNobel
Computational design of a synthetic PD-1 agonist
2021 StandoutNobel
On the Universe of Protein Folds
2013 StandoutNobel
Engineering a Rugged Nanoscaffold To Enhance Plug-and-Display Vaccination
2018
SignalP 6.0 predicts all five types of signal peptides using protein language models
2022 Standout
Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression
2015 StandoutNobel
Overcoming an optimization plateau in the directed evolution of highly efficient nerve agent bioscavengers
2017 StandoutNobel
Normal Modes of Prion Proteins: From Native to Infectious Particle
2011 StandoutNobel
Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently
2014
Feeding the world: improving photosynthetic efficiency for sustainable crop production
2019 Standout
Multilayered N-Glycoproteome Profiling Reveals Highly Heterogeneous and Dysregulated Protein N-Glycosylation Related to Alzheimer’s Disease
2019
Natural and Designed Proteins Inspired by Extremotolerant Organisms Can Form Condensates and Attenuate Apoptosis in Human Cells
2022 StandoutNobel
In silico analysis enabling informed design for genome editing in medicinal cannabis; gene families and variant characterisation
2019 Standout
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning
2021
Computational modeling of membrane proteins
2014
Evolutionary-scale prediction of atomic-level protein structure with a language model
2023 StandoutScience
Protein-Catalyzed Capture Agents
2019
Structural and Evolutionary Analysis Indicate That the SARS-CoV-2 Mpro Is a Challenging Target for Small-Molecule Inhibitor Design
2020
Monitoring plant diseases and pests through remote sensing technology: A review
2019 Standout
EnsembleGASVR: a novel ensemble method for classifying missense single nucleotide polymorphisms
2014
Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing
2017
Hybridization ddRAD‐sequencing for population genomics of nonmodel plants using highly degraded historical specimen DNA
2020
Seed Germination and Vigor
2012 Standout
B cell–intrinsic TBK1 is essential for germinal center formation during infection and vaccination in mice
2021 StandoutNobel
Eukaryotic genomes from a global metagenomic data set illuminate trophic modes and biogeography of ocean plankton
2023
Claudins and the Modulation of Tight Junction Permeability
2013 Standout
g_mmpbsa—A GROMACS Tool for High-Throughput MM-PBSA Calculations
2014 Standout
Accurate proteome-wide missense variant effect prediction with AlphaMissense
2023 StandoutScienceNobel
Surface Glycoproteomic Analysis Reveals That Both Unique and Differential Expression of Surface Glycoproteins Determine the Cell Type
2019
Corneal surface glycosylation is modulated by IL‐1R and Pseudomonas aeruginosa challenge but is insufficient for inhibiting bacterial binding
2017 StandoutNobel
Chemical Glycoproteomics
2016 StandoutNobel
Putative Inhibitors of SARS-CoV-2 Main Protease from A Library of Marine Natural Products: A Virtual Screening and Molecular Modeling Study
2020 Standout
Protein contact prediction using metagenome sequence data and residual neural networks
2019 StandoutNobel
Works of Bent Petersen being referenced
The Whole Genome Sequence and mRNA Transcriptome of the Tropical Cyclopoid Copepod Apocyclops royi
2019
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
2017
NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning
2019
Structural Conservation Despite Huge Sequence Diversity Allows EPCR Binding by the PfEMP1 Family Implicated in Severe Childhood Malaria
2014
The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics
2017
A generic method for assignment of reliability scores applied to solvent accessibility predictions
2009
Palaeogenomic insights into the origins of French grapevine diversity
2019
NetTurnP – Neural Network Prediction of Beta-turns by Use of Evolutionary Information and Predicted Protein Sequence Features
2010