Standout Papers
Citation Impact
Citing Papers
rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data
2014 Standout
Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors
2009 StandoutScience
MYB61 Is Required for Mucilage Deposition and Extrusion in the Arabidopsis Seed Coat
2001
A Small Family of MYB -Regulatory Genes Controls Floral Pigmentation Intensity and Patterning in the Genus Antirrhinum
2006
Capturing Chromosome Conformation
2002 StandoutScience
JASMONATE-INSENSITIVE1 Encodes a MYC Transcription Factor Essential to Discriminate between Different Jasmonate-Regulated Defense Responses in Arabidopsis[W]
2004
Functional diversification of MYB23 and GL1 genes in trichome morphogenesis and initiation
2005
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over‐expressing an MYB transcription factor
2005
MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana
2008
Caught Red-Handed:RcEncodes a Basic Helix-Loop-Helix Protein Conditioning Red Pericarp in Rice
2006
Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco
2010
Two basic-helix-loop-helix genes (MYC-146 and GL3) from Arabidopsis can activate anthocyanin biosynthesis in a white-flowered Matthiola incana mutant
2003
Identification of conserved gene structures and carboxy-terminal motifs in the Myb gene family of Arabidopsis and Oryza sativa L. ssp. indica
2004
PH4 of Petunia Is an R2R3 MYB Protein That Activates Vacuolar Acidification through Interactions with Basic-Helix-Loop-Helix Transcription Factors of the Anthocyanin Pathway
2006
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
2011 Standout
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
2000 StandoutNature
Identification and Characterization of R2R3-MYB and bHLH Transcription Factors Regulating Anthocyanin Biosynthesis in Gentian Flowers
2008
TT2, TT8, and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis thaliana
2004
GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses
2017 Standout
Evolutionary History of a Specialized P450 Propane Monooxygenase
2008 StandoutNobel
The repurposing of type I-E CRISPR-Cascade for gene activation in plants
2019
A spatial dissection of the Arabidopsis floral transcriptome by MPSS
2008
Overexpression analysis of plant transcription factors
2003
Phage-assisted evolution of an adenine base editor with improved Cas domain compatibility and activity
2020 StandoutNobel
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
2012 Standout
Molecular Bases for Circadian Clocks
1999 Standout
Epigenetics: A Landscape Takes Shape
2007 Standout
The Basic Helix-Loop-Helix Transcription Factor MYC1 Is Involved in the Regulation of the Flavonoid Biosynthesis Pathway in Grapevine
2010
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
2015 Standout
Combinatorial and computational challenges for biocatalyst design
2001 StandoutNatureNobel
Comprehensive identification of Arabidopsis thaliana MYB transcription factors interacting with R/B‐like BHLH proteins
2004
Analysis of bHLH and MYB domain proteins: species‐specific regulatory differences are caused by divergent evolution of target anthocyanin genes
1998
The MYB Transcription Factor Superfamily of Arabidopsis: Expression Analysis and Phylogenetic Comparison with the Rice MYB Family
2006
c‐MYB oncogene‐like genes encoding three MYB repeats occur in all major plant lineages
2000
A novel myb‐related gene from Arabidopsis thaliana
1996
Vintage reds and whites: combinatorial transcription factor utilization in hematopoietic differentiation
1994
Ordered origin of the typical two- and three-repeat Myb genes
2003
Genome-wide non-mendelian inheritance of extra-genomic information in Arabidopsis
2005 Nature
A Novel Jasmonic Acid-Inducible Rice myb Gene Associates with Fungal Infection and Host Cell Death
2001
The Molecular Genetics of Crop Domestication
2006 Standout
The interaction domains of the plant Myc-like bHLH transcription factors can regulate the transactivation strength
2007
The JAZ family of repressors is the missing link in jasmonate signalling
2007 StandoutNature
JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signalling
2007 StandoutNature
Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage
2017 StandoutNature
Cloning and characterization of a UV-B-inducible maize flavonol synthase
2010
The Basic Helix-Loop-Helix Transcription Factor Family in Plants: A Genome-Wide Study of Protein Structure and Functional Diversity
2003
Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca)
2007
AtMYB32 is required for normal pollen development in Arabidopsis thaliana
2004
MYB transcription factors in plants
1997
Prediction of Plant MicroRNA Targets
2002 Standout
Highly parallel genomic assays
2006
Platelet Activation and Atherothrombosis
2007 Standout
The Mammalian Epigenome
2007 Standout
The R2R3-MYB gene family in Arabidopsis thaliana
2001 Standout
The potential of nucleic acid repair in functional genomics
2001
The biochemistry and medical significance of the flavonoids
2002 Standout
WEREWOLF, a MYB-Related Protein in Arabidopsis, Is a Position-Dependent Regulator of Epidermal Cell Patterning
1999
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
2010 Standout
IT3F: A web-based tool for functional analysis of transcription factors in plants
2008
Plant pathogens and integrated defence responses to infection
2001 StandoutNature
A R2R3 Type MYB Transcription Factor Is Involved in the Cold Regulation of CBF Genes and in Acquired Freezing Tolerance
2006
On the Dependency of Cellular Protein Levels on mRNA Abundance
2016 Standout
Identification of target genes for a MYB-type anthocyanin regulator in Gerbera hybrida
2008
Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway
2011 Standout
The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98
2008
TT8 controls its own expression in a feedback regulation involving TTG1 and homologous MYB and bHLH factors, allowing a strong and cell‐specific accumulation of flavonoids in Arabidopsis thaliana
2006
The Single-End Invasion
2001
Transcriptional control of anthocyanin biosynthetic genes in the Caryophyllales
2006
Regulation of CAPRICE Transcription by MYB Proteins for Root Epidermis Differentiation in Arabidopsis
2005
Analysis of the grape MYB R2R3 subfamily reveals expanded wine quality-related clades and conserved gene structure organization across Vitis and Arabidopsis genomes
2008
Essential Dynamics from NMR Clusters: Dynamic Properties of the Myb DNA-Binding Domain and a Hinge-Bending Enhancing Variant
1998
Sn, a maize bHLH gene, modulates anthocyanin and condensed tannin pathways in Lotus corniculatus
2003
MYB transcription factors in Arabidopsis
2010 Standout
Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis
2000
White grapes arose through the mutation of two similar and adjacent regulatory genes
2007
Homologous chromosome interactions in meiosis: diversity amidst conservation
2005
Comparing effects of mTR and mTERT deletion on gene expression and DNA damage response: a critical examination of telomere length maintenance-independent roles of telomerase
2009 StandoutNobel
Isochorismate synthase is required to synthesize salicylic acid for plant defence
2001 StandoutNature
Platelet genomics and proteomics in human health and disease
2005
A genomic perspective on plant transcription factors
2000
Stem cell transcriptome profiling via massive-scale mRNA sequencing
2008
RNA-Seq: a revolutionary tool for transcriptomics
2008 Standout
Independent and interdependent functions of LAF1 and HFR1 in phytochrome A signaling
2007
A WD-repeat-containing putative regulatory protein in anthocyanin biosynthesis in Perilla frutescens
2002
Chemistry of Class 1 CRISPR-Cas effectors: Binding, editing, and regulation
2020 StandoutNobel
Towards functional characterisation of the members of theR2R3‐MYBgene family fromArabidopsis thaliana
1998
Next Generation Sequencing Analysis of Human Platelet PolyA+ mRNAs and rRNA-Depleted Total RNA
2013 StandoutNobel
Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light-responsive and tissue-specific activation of phenylpropanoid biosynthesis genes
2005
Differential regulation of closely related R2R3‐MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling
2007
Myogenesis and developmental control genes
1990
Anthocyanin biosynthesis in pears is regulated by a R2R3-MYB transcription factor PyMYB10
2010
Arabidopsis MYB30 is a direct target of BES1 and cooperates with BES1 to regulate brassinosteroid‐induced gene expression
2008
The Transcription Factor GATA-3 Is Necessary and Sufficient for Th2 Cytokine Gene Expression in CD4 T Cells
1997 Standout
Two Cysteines in Plant R2R3 MYB Domains Participate in REDOX-dependent DNA Binding
2004
The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco
2001
Mammalian cell–based optimization of the biarsenical-binding tetracysteine motif for improved fluorescence and affinity
2005 StandoutNobel
An estrogen receptor‐based transactivator XVE mediates highly inducible gene expression in transgenic plants
2000
The Grapevine Transcription Factor VvMYBPA1 Regulates Proanthocyanidin Synthesis during Fruit Development
2007
The evolution of gene expression levels in mammalian organs
2011 StandoutNatureNobel
Inference of Isoforms from Short Sequence Reads
2011
Proanthocyanidin-Accumulating Cells in Arabidopsis Testa: Regulation of Differentiation and Role in Seed Development
2003
GENETICS AND BIOCHEMISTRY OF SEED FLAVONOIDS
2006
Activation Tagging Identifies a Conserved MYB Regulator of Phenylpropanoid Biosynthesis
2000
Meiotic Chromosomes: Integrating Structure and Function
1999
The Grapevine R2R3-MYB Transcription Factor VvMYBF1 Regulates Flavonol Synthesis in Developing Grape Berries
2009
Editing the Genome Without Double-Stranded DNA Breaks
2017
G2/M-Phase–Specific Transcription during the Plant Cell Cycle Is Mediated by c-Myb–Like Transcription Factors
2001
Regulation of Cell Proliferation in the Stomatal Lineage by theArabidopsisMYB FOUR LIPS via Direct Targeting of Core Cell Cycle Genes
2010
Phosphorylation of Opaque2 changes diurnally and impacts its DNA binding activity.
1997
An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae
2010
Evidence for direct activation of an anthocyanin promoter by the maize C1 protein and comparison of DNA binding by related Myb domain proteins.
1997
Transactivation of anthocyanin biosynthetic genes following transfer of B regulatory genes into maize tissues.
1990
Regulation of the mec-3 gene by the C.elegans homeoproteins UNC-86 and MEC-3.
1992 StandoutNobel
The TRANSPARENT TESTA12 Gene of Arabidopsis Encodes a Multidrug Secondary Transporter-like Protein Required for Flavonoid Sequestration in Vacuoles of the Seed Coat Endothelium
2001
A maize zinc-finger protein binds the prolamin box in zein gene promoters and interacts with the basic leucine zipper transcriptional activator Opaque2
1997
Activation Tagging in Tomato Identifies a Transcriptional Regulator of Anthocyanin Biosynthesis, Modification, and Transport
2003
Functional polymorphisms of the human multidrug-resistance gene: Multiple sequence variations and correlation of one allele with P-glycoprotein expression and activity in vivo
2000 Standout
Recently Duplicated Maize R2R3 Myb Genes Provide Evidence for Distinct Mechanisms of Evolutionary Divergence after Duplication
2003
Signal perception and transduction in plant defense responses.
1997
The Transcription Factor VvMYB5b Contributes to the Regulation of Anthocyanin and Proanthocyanidin Biosynthesis in Developing Grape Berries
2008
Isolated sequences from the linked Myf-5 and MRF4 genes drive distinct patterns of muscle-specific expression in transgenic mice
1993 StandoutNobel
Multiple Repeats of a Promoter Segment Causes Transcription Factor Autoregulation in Red Apples
2009
Control of cell and petal morphogenesis by R2R3 MYB transcription factors
2007
Isolation and characterization of a tobacco mosaic virus-inducible myb oncogene homolog from tobacco
1996
The Arabidopsis Transcription Factor MYB12 Is a Flavonol-Specific Regulator of Phenylpropanoid Biosynthesis
2005
Characterization of a Grapevine R2R3-MYB Transcription Factor That Regulates the Phenylpropanoid Pathway
2005
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
2012 Standout
Ectopic Expression of VvMybPA2 Promotes Proanthocyanidin Biosynthesis in Grapevine and Suggests Additional Targets in the Pathway
2008
Early Allelic Selection in Maize as Revealed by Ancient DNA
2003 StandoutScienceNobel
MYB-Related Transcription Factor NtMYB2 Induced by Wounding and Elicitors is a Regulator of the Tobacco Retrotransposon Tto1 and Defense-Related Genes
2000
An Evolutionary View of the Mechanism for Immune and Genome Diversity
2012 StandoutNobel
Flavonoids and isoflavonoids – a gold mine for metabolic engineering
1999
Activation of the Maize Anthocyanin Gene a2 Is Mediated by an Element Conserved in Many Anthocyanin Promoters1
1998
Evolution of Anthocyanin Biosynthesis in Maize Kernels: The Role of Regulatory and Enzymatic Loci
1996
Exploring the possibilities presented by protein engineering
2000
Mutations in thepale aleurone color1Regulatory Gene of theZea maysAnthocyanin Pathway Have Distinct Phenotypes Relative to the Functionally SimilarTRANSPARENT TESTA GLABRA1Gene inArabidopsis thaliana [W]
2004
How genes paint flowers and seeds
1998
Arabidopsis and Nicotiana Anthocyanin Production Activated by Maize Regulators R and C1
1992 Science
A Gateway Cloning Vector Set for High-Throughput Functional Analysis of Genes in Planta
2003 Standout
The Wound-, Pathogen-, and Ultraviolet B-ResponsiveMYB134Gene Encodes an R2R3 MYB Transcription Factor That Regulates Proanthocyanidin Synthesis in Poplar
2009
Methods for Allocating Ambiguous Short-reads
2010
Production of the Isoflavones Genistein and Daidzein in Non-Legume Dicot and Monocot Tissues
2000
The Arabidopsis TT2 Gene Encodes an R2R3 MYB Domain Protein That Acts as a Key Determinant for Proanthocyanidin Accumulation in Developing Seed
2001
Activation of Anthocyanin Biosynthesis inGerbera hybrida(Asteraceae) Suggests Conserved Protein-Protein and Protein-Promoter Interactions between the Anciently Diverged Monocots and Eudicots
2003
In vitro and in vivo nucleotide exchange directed by chimeric RNA/DNA oligonucleotides in Saccharomyces cerevisae
2001
A Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene.
1997
The Developmental Expression of the Maize Regulatory Gene Hopi Determines Germination-Dependent Anthocyanin Accumulation
2000
Molecular homology among members of the R gene family in maize
1993
DkMyb4 Is a Myb Transcription Factor Involved in Proanthocyanidin Biosynthesis in Persimmon Fruit
2009
Arabidopsis Transcription Factors: Genome-Wide Comparative Analysis Among Eukaryotes
2000 StandoutScience
The AmMYB308 and AmMYB330 Transcription Factors from Antirrhinum Regulate Phenylpropanoid and Lignin Biosynthesis in Transgenic Tobacco
1998
Overexpression of AtMYB44 Enhances Stomatal Closure to Confer Abiotic Stress Tolerance in Transgenic Arabidopsis
2007
DNA Double-Strand Breaks
2002 StandoutNobel
High-Flavonol Tomatoes Resulting from the Heterologous Expression of the Maize Transcription Factor Genes LC and C1
2002
Altered regulation of tomato and tobacco pigmentation genes caused by the delila gene of Antirrhinum
1995
The Fluorescent Toolbox for Assessing Protein Location and Function
2006 StandoutScienceNobel
More than 80R2R3‐MYB regulatory genes in the genome of Arabidopsis thaliana
1998
A novel DNA binding protein with homology to Myb oncoproteins containing only one repeat can function as a transcriptional activator.
1994
ANTHOCYANIN1 of Petunia Controls Pigment Synthesis, Vacuolar pH, and Seed Coat Development by Genetically Distinct Mechanisms
2002
The basic helix–loop–helix domain of maize R links transcriptional regulation and histone modifications by recruitment of an EMSY-related factor
2007
Developmentally distinct MYB genes encode functionally equivalent proteins in Arabidopsis
2001
Functional analysis of the transcriptional activator encoded by the maize B gene: evidence for a direct functional interaction between two classes of regulatory proteins.
1992
TopHat: discovering splice junctions with RNA-Seq
2009 Standout
Phylogenetic Perspectives in Innate Immunity
1999 StandoutScienceNobel
Functional Complementation of Anthocyanin Sequestration in the Vacuole by Widely Divergent Glutathione S-Transferases
1998
Evidence for a Role for AtMYB2 in the Induction of the Arabidopsis Alcohol Dehydrogenase Gene (ADH1) by Low Oxygen
1998
Functional Differentiation of Lotus japonicus TT2s, R2R3-MYB Transcription Factors Comprising a Multigene Family
2008
Flavonoid Biosynthesis. A Colorful Model for Genetics, Biochemistry, Cell Biology, and Biotechnology
2001 Standout
Production of Salicylic Acid Precursors Is a Major Function of Phenylalanine Ammonia-Lyase in the Resistance of Arabidopsis to Peronospora parasitica.
1996
Regulatory Genes Controlling Anthocyanin Pigmentation Are Functionally Conserved among Plant Species and Have Distinct Sets of Target Genes.
1993
anthocyanin1 of Petunia Encodes a Basic Helix-Loop-Helix Protein That Directly Activates Transcription of Structural Anthocyanin Genes
2000
Works of Ben Bowen being referenced
The myb-homologous P gene controls phlobaphene pigmentation in maize floral organs by directly activating a flavonoid biosynthetic gene subset
1994
Massively parallel signature sequencing (MPSS) as a tool for in-depth quantitative gene expression profiling in all organisms
2002 StandoutNobel
Maize R2R3 Myb Genes: Sequence Analysis Reveals Amplification in the Higher Plants
1999
Identification of the residues in the Myb domain of maize C1 that specify the interaction with the bHLH cofactor R
2000
Engineering Secondary Metabolism in Maize Cells by Ectopic Expression of Transcription Factors
1998
Expression Profiling of the Maize Flavonoid Pathway Genes Controlled by Estradiol-Inducible Transcription Factors CRC and P
2000
Engineering Secondary Metabolism in Maize Cells by Ectopic Expression of Transcription Factors
1998
A Regulatory Gene as a Novel Visible Marker for Maize Transformation
1990 Science
Targeted manipulation of maize genes in vivo using chimeric RNA/DNA oligonucleotides
1999
Three-Dimensional Microscopy of the Rad51 Recombination Protein during Meiotic Prophase
1999
Dominant Negative Mutants of Opaque2 Suppress Transactivation of a 22-kD Zein Promoter by Opaque2 in Maize Endosperm Cells
1993
Expression Profiling of the Maize Flavonoid Pathway Genes Controlled by Estradiol-Inducible Transcription Factors CRC and P
2000