Citation Impact
Citing Papers
The biomass distribution on Earth
2018 Standout
Xanthorhodopsin: A Proton Pump with a Light-Harvesting Carotenoid Antenna
2005 Science
A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae
2020 Standout
VIRTUS: a pipeline for comprehensive virus analysis from conventional RNA-seq data
2020 StandoutNobel
Functionally relevant diversity of closely related Nitrospira in activated sludge
2014
A survey of best practices for RNA-seq data analysis
2016 Standout
Improved metagenomic analysis with Kraken 2
2019 Standout
Microbial deterioration of cultural heritage and works of art — tilting at windmills?
2013 Standout
OrthoFinder: phylogenetic orthology inference for comparative genomics
2019 Standout
Genome sequence-based species delimitation with confidence intervals and improved distance functions
2013 Standout
Identification of possible source markers in marine dissolved organic matter using ultrahigh resolution mass spectrometry
2009
Embracing the unknown: disentangling the complexities of the soil microbiome
2017 Standout
Exploring the viral world through metagenomics
2011
Gut Microbiota Profiling: Metabolomics Based Approach to Unravel Compounds Affecting Human Health
2016
Microbial tryptophan catabolites in health and disease
2018 Standout
Towards a taxonomy of Bacteria and Archaea based on interactive and cumulative data repositories
2011
Past and future species definitions for Bacteria and Archaea
2015
The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms
2013 Standout
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
The enigmatic archaeal virosphere
2017
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
2015 Standout
The importance of anabolism in microbial control over soil carbon storage
2017 Standout
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
2019 Standout
PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome
2013
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
2018 Standout
Revised phylogeny of Bacteroidetes and proposal of sixteen new taxa and two new combinations including Rhodothermaeota phyl. nov.
2016
MassTRIX: mass translator into pathways
2008
Reclassification of Rhodobium marinum and Rhodobium pfennigii as Afifella marina gen. nov. comb. nov. and Afifella pfennigii comb. nov., a new genus of photoheterotrophic Alphaproteobacteria and emended descriptions of Rhodobium, Rhodobium orientis and Rhodobium gokarnense
2008
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
2012 Standout
The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains
2008
PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions
2010
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
2013 Standout
Marine sequestration of carbon in bacterial metabolites
2015
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
2014 Standout
Microbial Diversity in a Hypersaline Sulfate Lake: A Terrestrial Analog of Ancient Mars
2017 StandoutNobel
NCBI prokaryotic genome annotation pipeline
2016 Standout
Diversity, stability and resilience of the human gut microbiota
2012 StandoutNature
Metabolomics Reveals Metabolic Biomarkers of Crohn's Disease
2009
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
Directed Evolution of Gloeobacter violaceus Rhodopsin Spectral Properties
2014 StandoutNobel
Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex
2016
Impact of instrument and experiment parameters on reproducibility of ultrahigh resolution ESI FT-ICR mass spectra of natural organic matter
2010
Fate of Dispersants Associated with the Deepwater Horizon Oil Spill
2011 Standout
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
2015 Standout
Mobile Genetic Elements Associated with Antimicrobial Resistance
2018 Standout
Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
2012 Standout
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
2018 Standout
Shifting the genomic gold standard for the prokaryotic species definition
2009 Standout
Microbial Biogeography: From Taxonomy to Traits
2008 Science
Decoupling function and taxonomy in the global ocean microbiome
2016 StandoutScience
The micro-biota of a sub-surface monument the medieval chapel of St. Virgil (Vienna, Austria)
2009
Ecological metabolomics: overview of current developments and future challenges
2011
Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community
2013
Introduction to the human gut microbiota
2017 Standout
The Reciprocal Interactions between Polyphenols and Gut Microbiota and Effects on Bioaccessibility
2016 Standout
Complete Sequence of pOZ176, a 500-Kilobase IncP-2 Plasmid Encoding IMP-9-Mediated Carbapenem Resistance, from Outbreak Isolate Pseudomonas aeruginosa 96
2013
Biosynthetic Origin of the Antibiotic Pseudopyronines A and B in Pseudomonas putida BW11M1
2015
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
The Controversial Role of Human Gut Lachnospiraceae
2020 Standout
Direct Determination of Resonance Energy Transfer in Photolyase: Structural Alignment for the Functional State
2014 StandoutNobel
Role of the gut microbiota in health and chronic gastrointestinal disease: understanding a hidden metabolic organ
2013
Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
2009 Standout
Classification of Bacteria and Archaea: Past, present and future
2009
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
2015 Standout
The bacterial pan-genome:a new paradigm in microbiology.
2010
Antimicrobial Resistance in ESKAPE Pathogens
2020 Standout
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
2019 Standout
Works of Arantxa Peña being referenced
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains
2010
High Metabolomic Microdiversity within Co-Occurring Isolates of the Extremely Halophilic Bacterium Salinibacter ruber
2013
Phylogenomics and systematics in Pseudomonas
2015
Phylogenetic position of Salinibacter ruber based on concatenated protein alignments
2006
Spatial and seasonal prokaryotic community dynamics in ponds of increasing salinity of Sfax solar saltern in Tunisia
2012
Prokaryotic diversity in Tuz Lake, a hypersaline environment in Inland Turkey
2008
Intraspecific comparative analysis of the species Salinibacter ruber
2005
Metagenomic approach to the study of halophages: the environmental halophage 1
2007
Metabolic evidence for biogeographic isolation of the extremophilic bacterium Salinibacter ruber
2008
Complete Genome Sequence of the Naphthalene-Degrading Bacterium Pseudomonas stutzeri AN10 (CCUG 29243)
2012