Citation Impact
Citing Papers
Structure of the Human Telomere in K + Solution: An Intramolecular (3 + 1) G-Quadruplex Scaffold
2006
Molecular basis of halorespiration control by CprK, a CRP‐FNR type transcriptional regulator
2008
Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding
2009 StandoutNobel
Predicting indirect readout effects in protein–DNA interactions
2004
Origins of Specificity in Protein-DNA Recognition
2010
MutL traps MutS at a DNA mismatch
2015 StandoutNobel
Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease
2010 StandoutScienceNobel
Simultaneous prediction of protein folding and docking at high resolution
2009 StandoutNobel
Structural inference of native and partially folded RNA by high-throughput contact mapping
2008 StandoutNobel
A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
2012 StandoutScienceNobel
Structures of the CRISPR genome integration complex
2017 StandoutScienceNobel
Catalysis by dihydrofolate reductase and other enzymes arises from electrostatic preorganization, not conformational motions
2011 StandoutNobel
Automated de novo prediction of native-like RNA tertiary structures
2007 StandoutNobel
NMR Structure Determination for Larger Proteins Using Backbone-Only Data
2010 StandoutScienceNobel
Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome
2009 Science
Structures of the RNA-guided surveillance complex from a bacterial immune system
2011 StandoutNatureNobel
DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
2014 StandoutNatureNobel
De novo design of allosterically switchable protein assemblies
2024 StandoutNatureNobel
An integrated encyclopedia of DNA elements in the human genome
2012 StandoutNature
3D reconstruction and comparison of shapes of DNA minicircles observed by cryo-electron microscopy
2006 StandoutNobel
A Conformational Switch in Bacteriophage P22 Portal Protein Primes Genome Injection
2008
Oligonucleotide aptamers that recognize small molecules
1999
QM/MM Methods for Biomolecular Systems
2009 Standout
Intrinsic dynamics of an enzyme underlies catalysis
2005 Nature
A double chain reversal loop and two diagonal loops define the architecture of unimolecular DNA quadruplex containing a pair of stacked G(syn)·G(syn)·G(anti)·G(anti) tetrads flanked by a G·(T-T) triad and a T·T·T triple11Edited by M. F. Summers
2001
Identification of mixed di-cation forms of G-quadruplex in solution
2005
Kinetics of double-chain reversals bridging contiguous quartets in tetramolecular quadruplexes
2006
Structural basis for triplet repeat disorders: a computational analysis
1999 StandoutNobel
3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures
2008
Solution structure of domain 5 of a group II intron ribozyme reveals a new RNA motif
2004
Flexible DNA: Genetically Unstable CTG·CAG and CGG·CCG from Human Hereditary Neuromuscular Disease Genes
1997
In vitro selection of nucleic acids for diagnostic applications
2000
A-tract clusters may facilitate DNA packaging in bacterial nucleoid
2005
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
Role of the Biomolecular Energy Gap in Protein Design, Structure, and Evolution
2012 StandoutNobel
Formation Pathways of a Guanine-Quadruplex DNA Revealed by Molecular Dynamics and Thermodynamic Analysis of the Substates
2003
Foreign DNA capture during CRISPR–Cas adaptive immunity
2015 StandoutNatureNobel
[21] Rapid genetic analysis of RNA-protein interactions by translational repression in escherichia coli
2000
Sequence‐dependent DNA structure
1996
The role of dynamics in allosteric regulation
2003
The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA
2016 StandoutNatureNobel
Solution structure of the DNA-binding domain and model for the complex of multifunctiona hexameric arginine represser with DNA
1997
Vertebrate telomere repeat DNAs favor external loop propeller quadruplex structures in the presence of high concentrations of potassium
2005
The structure of DNA in the nucleosome core
2003 Nature
Relating the Structure ofHIV-1 Reverse Transcriptaseto Its Processing Step
2000
Comparative Binding of p53 to its Promoter and DNA Recognition Elements
2005
RNA-guided genetic silencing systems in bacteria and archaea
2012 StandoutNatureNobel
Protein-DNA binding specificity predictions with structural models
2005
Computational redesign of endonuclease DNA binding and cleavage specificity
2006 StandoutNatureNobel
The influence of DNA stiffness upon nucleosome formation
2004
The Solution Structure of d(G4T4G3)2: a Bimolecular G-quadruplex with a Novel Fold
2002
Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution
2006
d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH 4 +
2004
Biology and Applications of CRISPR Systems: Harnessing Nature’s Toolbox for Genome Engineering
2016 StandoutNobel
Integrase-mediated spacer acquisition during CRISPR–Cas adaptive immunity
2015 StandoutNatureNobel
Non-B DNA Conformations, Genomic Rearrangements, and Human Disease
2004
The structure of the HIV-1 RRE high affinity rev binding site at 1.6 Å resolution
2000 StandoutNobel
Intramolecular Higher Order Packing of Parallel Quadruplexes Comprising a G:G:G:G Tetrad and a G(:A):G(:A):G(:A):G Heptad of GGA Triplet Repeat DNA
2003
The Biology of CRISPR-Cas: Backward and Forward
2018 StandoutNobel
Sequence-dependent DNA Structure: A Database of Octamer Structural Parameters
2003
G‐Quartets 40 Years Later: From 5′‐GMP to Molecular Biology and Supramolecular Chemistry
2004
Atomic force microscopy reveals kinks in the p53 response element DNA
2002
Two-repeat Tetrahymena Telomeric d(TGGGGTTGGGGT) Sequence Interconverts Between Asymmetric Dimeric G-quadruplexes in Solution
2004
Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detection
2016 StandoutNatureNobel
Small-molecule interaction with a five-guanine-tract G-quadruplex structure from the human MYC promoter
2005
Quadruplex DNA: sequence, topology and structure
2006 Standout
RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions
2011 StandoutNobel
Quantitative exploration of the molecular origin of the activation of GTPase
2013 StandoutNobel
Residual Dipolar Couplings in NMR Structure Analysis
2004
RNA–protein analysis using a conditional CRISPR nuclease
2013 StandoutNobel
Comprehensive genetic selection revealed essential bases in the peptidyl-transferase center
2006 StandoutNobel
Dynamical Contributions to Enzyme Catalysis: Critical Tests of A Popular Hypothesis
2006 StandoutNobel
The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals
2007 Standout
Isolation of high-affinity GTP aptamers from partially structured RNA libraries
2002 StandoutNobel
Propeller-Type Parallel-Stranded G-Quadruplexes in the Humanc-mycPromoter
2004
Structure-based prediction of DNA target sites by regulatory proteins
1999
Decrease in topoisomerase I is responsible for activation-induced cytidine deaminase (AID)-dependent somatic hypermutation
2011 StandoutNobel
Engineering the Quadruplex Fold: Nucleoside Conformation Determines Both Folding Topology and Molecularity in Guanine Quadruplexes
2006
The new frontier of genome engineering with CRISPR-Cas9
2014 StandoutScienceNobel
Unfolding of G-Quadruplexes: Energetic, and Ion and Water Contributions of G-Quartet Stacking
2006
An interlocked dimeric parallel-stranded DNA quadruplex: A potent inhibitor of HIV-1 integrase
2005
DNA Mismatch Repair: Functions and Mechanisms
2005 StandoutNobel
A bacterial Argonaute with noncanonical guide RNA specificity
2016 StandoutNobel
Residual Dipolar Couplings in Structure Determination of Biomolecules
2004
Modeling and design by hierarchical natural moves
2012 StandoutNobel
Transcriptional control of human p53-regulated genes
2008 Standout
Two-Repeat Human Telomeric d(TAGGGTTAGGGT) Sequence Forms Interconverting Parallel and Antiparallel G-Quadruplexes in Solution: Distinct Topologies, Thermodynamic Properties, and Folding/Unfolding Kinetics
2003
Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy
2003 StandoutNobel
(3 + 1) Assembly of Three Human Telomeric Repeats into an Asymmetric Dimeric G-Quadruplex
2005
Electrostatic Basis for Enzyme Catalysis
2006 StandoutNobel
Efficient Specific DNA Binding by p53 Requires both Its Central and C-Terminal Domains as Revealed by Studies with High-Mobility Group 1 Protein
2002
Determinants of DNA Quadruplex Structural Type: Sequence and Potassium Binding
1999
Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus
2011 StandoutNobel
Small Change in a G-Rich Sequence, a Dramatic Change in Topology: New Dimeric G-Quadruplex Folding Motif with Unique Loop Orientations
2003
Enzyme millisecond conformational dynamics do not catalyze the chemical step
2009 StandoutNobel
Extrahelical (CAG)/(CTG) triplet repeat elements support proliferating cell nuclear antigen loading and MutLα endonuclease activation
2013 StandoutNobel
Structure, Energetics, and Dynamics of the Nucleic Acid Base Pairs: NonempiricalAb InitioCalculations
1999
Protein structure prediction for the male-specific region of the human Y chromosome
2004 StandoutNobel
DNA conformations in mismatch repair probed in solution by X-ray scattering from gold nanocrystals
2013
Structural Dynamics and Cation Interactions of DNA Quadruplex Molecules Containing Mixed Guanine/Cytosine Quartets Revealed by Large-Scale MD Simulations
2001
NMR Characterization of the Dynamics of Biomacromolecules
2004
The Tail Wagging the Dog: Insights into Catalysis in R67 Dihydrofolate Reductase
2010
Works of Andrey Gorin being referenced
A dimeric DNA interface stabilized by stacked A · (G · G · G · G) · A hexads and coordinated monovalent cations
2000
Dimeric DNA quadruplex containing major groove-aligned A·T·A·T and G·C·G·C tetrads stabilized by inter-subunit Watson-Crick A·T and G·C pairs11Edited by M. F. Summers
2001
Deep penetration of an α-helix into a widened RNA major groove in the HIV-1 rev peptide–RNA aptamer complex
1996
A two-stranded template-based approach to G·(C-A) triad formation: designing novel structural elements into an existing DNA framework 1 1Edited by M. Summers
2000
Concerted motions in HIV-1 TAR RNA may allow access to bound state conformations: RNA dynamics from NMR residual dipolar couplings 1 1Edited by M. F. Summers
2002
Towards Structural Genomics of RNA: Rapid NMR Resonance Assignment and Simultaneous RNA Tertiary Structure Determination Using Residual Dipolar Couplings
2002
V-shaped scaffold: a new architectural motif identified in an A·(G·G·G·G) pentad-containing dimeric DNA quadruplex involving stacked G(anti)·G(anti)·G(anti)·G(syn) tetrads11Edited by M. F. Summers
2001
Architectural Accommodation in the Complex of Four p53 DNA Binding Domain Peptides with the p21/waf1/cip1 DNA Response Element
1997
DNA stretching and compression: large-scale simulations of double helical structures 1 1Edited by I. Tinoco
1999
B-DNA Twisting Correlates with Base-pair Morphology
1995
Determining Stoichiometry in Homomultimeric Nucleic Acid Complexes Using Magnetic Field Induced Residual Dipolar Couplings
2001
DNA sequence-dependent deformability deduced from protein–DNA crystal complexes
1998
Pulling and pushing the DNA double helix
1999
Bending of DNA by Asymmetric Charge Neutralization: All-Atom Energy Simulations
2002
Protein Dynamics and Enzymatic Catalysis: Investigating the Peptidyl−Prolyl Cis−Trans Isomerization Activity of Cyclophilin A
2004
Solution structure of a Na cation stabilized DNA quadruplex containing G·G·G·G and G·C·G·C tetrads formed by G-G-G-C repeats observed in adeno-associated viral DNA 1 1Edited by I. Tinoco
1998
Stabilization of a Transition-State Analogue at the Active Site of Yeast Cytosine Deaminase: Importance of Proton Transfers
2007
Field- and Phage-Induced Dipolar Couplings in a Homodimeric DNA Quadruplex: Relative Orientation of G·(C−A) Triad and G-Tetrad Motifs and Direct Determination of C2 Symmetry Axis Orientation
2001