Standout Papers
Citation Impact
Citing Papers
Anti-Markovnikov alkene oxidation by metal-oxo–mediated enzyme catalysis
2017 StandoutScienceNobel
Protein interaction networks revealed by proteome coevolution
2019 StandoutScienceNobel
Principles for designing proteins with cavities formed by curved β sheets
2017 StandoutScienceNobel
Global analysis of protein folding using massively parallel design, synthesis, and testing
2017 StandoutScienceNobel
Comprehensive computational design of ordered peptide macrocycles
2017 StandoutScienceNobel
The Protein-Folding Problem, 50 Years On
2012 Science
Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences
2021
Origins of coevolution between residues distant in protein 3D structures
2017 StandoutNobel
Improved protein structure prediction using predicted interresidue orientations
2020 StandoutNobel
De novo design of self-assembling helical protein filaments
2018 StandoutScienceNobel
Improved de novo structure prediction in CASP 11 by incorporating coevolution information into Rosetta
2015 StandoutNobel
All-atom 3D structure prediction of transmembrane β-barrel proteins from sequences
2015
Protein structure determination using metagenome sequence data
2017 StandoutScienceNobel
Hallucinating symmetric protein assemblies
2022 StandoutScienceNobel
MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
2014
Accurate computational design of multipass transmembrane proteins
2018 StandoutScienceNobel
Discriminative modelling of context-specific amino acid substitution probabilities
2012
A comprehensive map of human glucokinase variant activity
2023
Evaluation of AlphaFold-Multimer prediction on multi-chain protein complexes
2023
Prediction of interresidue contacts with DeepMetaPSICOV in CASP13
2019
Computational Stabilization of a Non‐Heme Iron Enzyme Enables Efficient Evolution of New Function
2024 StandoutNobel
Analysis of distance‐based protein structure prediction by deep learning in CASP13
2019
Assessment of contact predictions in CASP12: Co‐evolution and deep learning coming of age
2017
Four-component protein nanocages designed by programmed symmetry breaking
2024 StandoutNatureNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
HH-suite3 for fast remote homology detection and deep protein annotation
2019
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
Computational design of soluble and functional membrane protein analogues
2024 StandoutNatureNobel
A suite of designed protein cages using machine learning and protein fragment-based protocols
2024
De novo design of allosterically switchable protein assemblies
2024 StandoutNatureNobel
De novo design of immunoglobulin-like domains
2022 StandoutNobel
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model
2017
Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28
2017
CoinFold: a web server for protein contact prediction and contact-assisted protein folding
2016
Discoveries in structure and physiology of mechanically activated ion channels
2020 StandoutNatureNobel
The Structure and Function of the Eukaryotic Ribosome
2012
MRFalign: Protein Homology Detection through Alignment of Markov Random Fields
2014
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
2013 StandoutNatureNobel
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information
2014 Standout
Improved Contact Predictions Using the Recognition of Protein Like Contact Patterns
2014
The road to fully programmable protein catalysis
2022 StandoutNatureNobel
High-Resolution Comparative Modeling with RosettaCM
2013 StandoutNobel
De novo design of luciferases using deep learning
2023 StandoutNatureNobel
Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3
2017 StandoutNatureNobel
Rational design of α-helical tandem repeat proteins with closed architectures
2015 StandoutNatureNobel
Massively parallel determination and modeling of endonuclease substrate specificity
2014 StandoutNobel
The coming of age of de novo protein design
2016 StandoutNatureNobel
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
De novo design of a fluorescence-activating β-barrel
2018 StandoutNatureNobel
De novo design of bioactive protein switches
2019 StandoutNatureNobel
Predicting functional effect of missense variants using graph attention neural networks
2022
The Phyre2 web portal for protein modeling, prediction and analysis
2015 Standout
De novo design of a four-fold symmetric TIM-barrel protein with atomic-level accuracy
2015 StandoutNobel
Exploring the repeat protein universe through computational protein design
2015 StandoutNatureNobel
Programmable design of orthogonal protein heterodimers
2018 StandoutNatureNobel
CasX enzymes comprise a distinct family of RNA-guided genome editors
2019 StandoutNatureNobel
Controlling protein assembly on inorganic crystals through designed protein interfaces
2019 StandoutNatureNobel
Cryo-EM structure of a type IV secretion system
2022 StandoutNatureNobel
The HDOCK server for integrated protein–protein docking
2020
Three-Dimensional Structures of Membrane Proteins from Genomic Sequencing
2012
A General Computational Approach for Repeat Protein Design
2014 StandoutNobel
Uniclust databases of clustered and deeply annotated protein sequences and alignments
2016
De novo protein design by deep network hallucination
2021 StandoutNatureNobel
Elucidation of AMPA receptor–stargazin complexes by cryo–electron microscopy
2016 StandoutScienceNobel
A structural model of the active ribosome-bound membrane protein insertase YidC
2014
Systematic discovery of natural CRISPR-Cas12a inhibitors
2018 StandoutScienceNobel
SWISS-MODEL: homology modelling of protein structures and complexes
2018 Standout
CRISPR-CasΦ from huge phages is a hypercompact genome editor
2020 StandoutScienceNobel
Protein structure prediction using multiple deep neural networks in the 13th Critical Assessment of Protein Structure Prediction (CASP13)
2019 StandoutNobel
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes
2018 StandoutScienceNobel
ComplexContact: a web server for inter-protein contact prediction using deep learning
2018
Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
2014 StandoutNobel
Analysis of several key factors influencing deep learning-based inter-residue contact prediction
2019
Structure of a Functional Amyloid Protein Subunit Computed Using Sequence Variation
2014
Structural relationship between the putative hair cell mechanotransduction channel TMC1 and TMEM16 proteins
2018
Large-scale determination of previously unsolved protein structures using evolutionary information
2015 StandoutNobel
CRISPR-Cas guides the future of genetic engineering
2018 StandoutScienceNobel
Accurate proteome-wide missense variant effect prediction with AlphaMissense
2023 StandoutScienceNobel
Ensembling multiple raw coevolutionary features with deep residual neural networks for contact‐map prediction in CASP13
2019
Works of Andreas Hauser being referenced
The DARC site: a database of aligned ribosomal complexes
2011
HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
2011 Standout