Citation Impact
Citing Papers
Generation of ordered protein assemblies using rigid three-body fusion
2021 StandoutNobel
Comprehensive computational design of ordered peptide macrocycles
2017 StandoutScienceNobel
De novo design of picomolar SARS-CoV-2 miniprotein inhibitors
2020 StandoutScienceNobel
Graph Laplacians and their Convergence on Random Neighborhood Graphs
2007
Regularization on Graphs with Function-adapted Diffusion Processes
2008
The ϕPA3 phage nucleus is enclosed by a self-assembling 2D crystalline lattice
2023 StandoutNobel
High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy
2013 StandoutNobel
Green synthesis of copper oxide nanoparticles using gum karaya as a biotemplate and their antibacterial application
2013 Standout
cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination
2017 Standout
Deterministic epidemic models on contact networks: Correlations and unbiological terms
2011
Non-uniform refinement: adaptive regularization improves single-particle cryo-EM reconstruction
2020 Standout
Gum Arabic as a Phytochemical Construct for the Stabilization of Gold Nanoparticles: In Vivo Pharmacokinetics and X‐ray‐Contrast‐Imaging Studies
2007 Standout
Continuous changes in structure mapped by manifold embedding of single-particle data in cryo-EM
2016 StandoutNobel
Fast and Accurate Modeling of Molecular Atomization Energies with Machine Learning
2012 Standout
The symmetries of image formation by scattering II Applications
2012
Intermediate states during mRNA–tRNA translocation
2012 StandoutNobel
Quantum State Tomography via Compressed Sensing
2010 StandoutNobel
A statistical approach to the initial volume problem in Single Particle Analysis by Electron Microscopy
2015
The symmetries of image formation by scattering I Theoretical framework
2012
Efficient Estimation of Three-Dimensional Covariance and its Application in the Analysis of Heterogeneous Samples in Cryo-Electron Microscopy
2015 StandoutNobel
An Emergent Space for Distributed Data With Hidden Internal Order Through Manifold Learning
2018
Ab Initio Structure Determination from Electron Microscopic Images of Single Molecules Coexisting in Different Functional States
2010
Robust Recovery of Subspace Structures by Low-Rank Representation
2012 Standout
Cryo-EM structure of a type IV secretion system
2022 StandoutNatureNobel
MU-MIMO Communications With MIMO Radar: From Co-Existence to Joint Transmission
2018 Standout
Matrix Completion With Noise
2010
Architecture of an RNA Polymerase II Transcription Pre-Initiation Complex
2013 StandoutScienceNobel
Towards a theoretical foundation for Laplacian-based manifold methods
2007
Discrete Signal Processing on Graphs
2013 Standout
Simplifying the representation of complex free-energy landscapes using sketch-map
2011
Clearance Properties of Nano-Sized Particles and Molecules as Imaging Agents: Considerations and Caveats
2008 Standout
Computer Simulation of Liquids
2017 Standout
Functional maps
2012
The emerging field of signal processing on graphs: Extending high-dimensional data analysis to networks and other irregular domains
2013 Standout
Probing the Dynamics of Protein–Protein Interactions at Neuronal Contacts by Optical Imaging
2008
Quantitative Connection between Ensemble Thermodynamics and Single-Molecule Kinetics: A Case Study Using Cryogenic Electron Microscopy and Single-Molecule Fluorescence Resonance Energy Transfer Investigations of the Ribosome
2015 StandoutNobel
Past, present, and future of simultaneous localization and mapping: Toward the robust-perception age
2016 Standout
Diffusion Maps, Reduction Coordinates, and Low Dimensional Representation of Stochastic Systems
2008
Time scale of diffusion in molecular and cellular biology
2014
Fluorescence Lifetime Measurements and Biological Imaging
2010 Standout
Conformations of macromolecules and their complexes from heterogeneous datasets
2014
Deep Learning on Graphs: A Survey
2020 Standout
Optimization and estimation on manifolds
2014
Finding Structure with Randomness: Probabilistic Algorithms for Constructing Approximate Matrix Decompositions
2011 Standout
Multicell MIMO Communications Relying on Intelligent Reflecting Surfaces
2020 Standout
Transmit MIMO Radar Beampattern Design via Optimization on the Complex Circle Manifold
2019
Complete Dictionary Recovery Over the Sphere I: Overview and the Geometric Picture
2016
Trajectories of the ribosome as a Brownian nanomachine
2014 StandoutNobel
Nonlinear dimensionality reduction in molecular simulation: The diffusion map approach
2011
Edge Artificial Intelligence for 6G: Vision, Enabling Technologies, and Applications
2021 Standout
Evaluation and Optimization of Discrete State Models of Protein Folding
2012 StandoutNobel
Improvements in Markov State Model Construction Reveal Many Non-Native Interactions in the Folding of NTL9
2013
Robust principal component analysis?
2011 Standout
Integrating diffusion maps with umbrella sampling: Application to alanine dipeptide
2011
Stochastic models of intracellular transport
2013
Epidemic processes in complex networks
2015 Standout
Wavelets on graphs via spectral graph theory
2010
PLUMED 2: New feathers for an old bird
2013 Standout
Geometric Deep Learning: Going beyond Euclidean data
2017 Standout
Regression Shrinkage and Selection via The Lasso: A Retrospective
2011 Standout
Physics-informed machine learning
2021 Standout
Exact Tensor Completion Using t-SVD
2016 Standout
Molecular Machines in Biology
2011 StandoutNobel
Nonlinear machine learning in simulations of soft and biological materials
2017
The translation elongation cycle—capturing multiple states by cryo-electron microscopy
2017 StandoutNobel
Toward Dual-functional Radar-Communication Systems: Optimal Waveform Design
2018 Standout
Dynamic Graph CNN for Learning on Point Clouds
2019 Standout
Nonlinear Machine Learning of Patchy Colloid Self-Assembly Pathways and Mechanisms
2014
Disentangling Rotational Dynamics and Ordering Transitions in a System of Self-Organizing Protein Nanorods via Rotationally Invariant Latent Representations
2021 StandoutNobel
A tutorial on spectral clustering
2007 Standout
A tensor-based method for missing traffic data completion
2013 Standout
A Singular Value Thresholding Algorithm for Matrix Completion
2010 Standout
Recent Trends, Applications, and Perspectives in 3D Shape Similarity Assessment
2015
The Power of Convex Relaxation: Near-Optimal Matrix Completion
2010 Standout
Anomalous diffusion models and their properties: non-stationarity, non-ergodicity, and ageing at the centenary of single particle tracking
2014 Standout
Nonconvex Optimization Meets Low-Rank Matrix Factorization: An Overview
2019
Story in a sample—the potential (and limitations) of cryo‐electron microscopy applied to molecular machines
2013 StandoutNobel
Works of Amit Singer being referenced
Approximating the Little Grothendieck Problem over the Unitary and Orthogonal Groups
2013
Approximating the Little Grothendieck Problem over the Orthogonal Group
2013
Vector diffusion maps and the connection Laplacian
2012
Detecting consistent common lines in cryo-EM by voting
2009
Timing of parenchymal enhancement on dual-phase dynamic helical CT of the liver: how long does the hepatic arterial phase predominate?
1996
Reference free structure determination through eigenvectors of center of mass operators
2009
Graph Laplacian Tomography From Unknown Random Projections
2008
Covariance Matrix Estimation for the Cryo-EM Heterogeneity Problem
2015
Fast wavelet-based single-particle reconstruction in Cryo-EM
2011
Angular synchronization by eigenvectors and semidefinite programming
2010
Three-Dimensional Structure Determination from Common Lines in Cryo-EM by Eigenvectors and Semidefinite Programming
2011
Narrow escape and leakage of Brownian particles
2008
Orientation Determination of Cryo-EM Images Using Least Unsquared Deviations
2013
Detecting intrinsic slow variables in stochastic dynamical systems by anisotropic diffusion maps
2009
From graph to manifold Laplacian: The convergence rate
2006
Exact and stable recovery of rotations for robust synchronization
2013
The narrow escape problem for diffusion in cellular microdomains
2007
Temporal ordering and registration of images in studies of developmental dynamics
2015
Tightness of the maximum likelihood semidefinite relaxation for angular synchronization
2016
Narrow Escape, Part III: Non-Smooth Domains and Riemann Surfaces
2006
Maximum entropy formulation of the Kirkwood superposition approximation
2004
Non-linear independent component analysis with diffusion maps
2007
Spectral independent component analysis
2006
Cramer-Rao bounds for synchronization of rotations
2013
Narrow Escape, Part II: The Circular Disk
2006
Robust estimation of rotations from relative measurements by maximum likelihood
2013
Narrow Escape, Part I
2006
A remark on global positioning from local distances
2008
Ionic diffusion through confined geometries: from Langevin equations to partial differential equations
2004
A Cheeger Inequality for the Graph Connection Laplacian
2013
Uniqueness of Low-Rank Matrix Completion by Rigidity Theory
2010