Citation Impact
Citing Papers
Deconstructing Cell-Free Extract Preparation for in Vitro Activation of Transcriptional Genetic Circuitry
2018
Long-Term Monitoring of Bacteria Undergoing Programmed Population Control in a Microchemostat
2005 StandoutScienceNobel
antiSMASH 6.0: improving cluster detection and comparison capabilities
2021 Standout
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
2015 Standout
One thousand plant transcriptomes and the phylogenomics of green plants
2019 StandoutNature
Piezo1 ion channel pore properties are dictated by C-terminal region
2015 StandoutNobel
The gut mycobiome of the Human Microbiome Project healthy cohort
2017 Standout
ColabFold: making protein folding accessible to all
2022 Standout
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
2023 Standout
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
2014
Directed evolution of Vibrio fischeri LuxR for increased sensitivity to a broad spectrum of acyl‐homoserine lactones
2004 StandoutNobel
Striking Oxygen Sensitivity of the Peptidylglycine α-Amidating Monooxygenase (PAM) in Neuroendocrine Cells
2015 StandoutNobel
Understanding biofilm resistance to antibacterial agents
2003 Standout
Quorum sensing as a population-density-dependent determinant of bacterial physiology
2001
Luminescence control in the marine bacterium Vibrio fischeri : an analysis of the dynamics of lux regulation 1 1Edited by D. E. Draper
2000
A hierarchical quorum‐sensing system in Yersinia pseudotuberculosis is involved in the regulation of motility and clumping
1999
The phzI gene of Pseudomonas aureofaciens 30–84 is responsible for the production of a diffusible signal required for phenazine antibiotic production
1996
Hydrophobic mismatch drives self-organization of designer proteins into synthetic membranes
2024 StandoutNobel
Novel synthetic analogs of the Pseudomonas autoinducer
1999
Listening in on bacteria: acyl-homoserine lactone signalling
2002
Involvement of N-acyl-l-homoserine lactone autoinducers in controlling the multicellular behaviour of Serratia liquefaciens
1996
Neuroendocrine–Bacterial Interactions in a Neurotoxin-Induced Model of Trauma
1997
Dual selection enhances the signaling specificity of a variant of the quorum-sensing transcriptional activator LuxR
2006 StandoutNobel
Autoregulation of luxR: the Vibrio harveyi lux‐operon activator functions as a repressor
1996
A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
2017 Standout
Self perception in bacteria: quorum sensing with acylated homoserine lactones
1998
CRISPR-Cas9 Circular Permutants as Programmable Scaffolds for Genome Modification
2019 StandoutNobel
Parallel Quorum Sensing Systems Converge to Regulate Virulence in Vibrio cholerae
2002
The Vibrio fischeri quorum‐sensing systems ain and lux sequentially induce luminescence gene expression and are important for persistence in the squid host
2003
Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3
2017 StandoutNatureNobel
Expanding the Enzyme Universe: Accessing Non‐Natural Reactions by Mechanism‐Guided Directed Evolution
2015 StandoutNobel
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
2015 Standout
The bacterial ‘enigma’: cracking the code of cell–cell communication
1995
The Natural Product Domain Seeker version 2 (NaPDoS2) webtool relates ketosynthase phylogeny to biosynthetic function
2022
Piezos thrive under pressure: mechanically activated ion channels in health and disease
2017 StandoutNobel
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs
2012
Biofilms: an emergent form of bacterial life
2016 Standout
Regulatory circuits and communication in Gram-negative bacteria
2004
In vitro biosynthesis of the Pseudomonas aeruginosa quorum‐sensing signal molecule N‐butanoyl‐L ‐homoserine lactone
1998
N-Acyl Homoserinelactone-mediated Gene Regulation in Gram-negative Bacteria
1999
Structural Basis and Specificity of Acyl-Homoserine Lactone Signal Production in Bacterial Quorum Sensing
2002
Quorum sensing in vibrios: Complexity for diversification
2006
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
Characterization of the Erwinia chrysanthemi expI–expR locus directing the synthesis of two N‐acyl‐homoserine lactone signal molecules
1998
Meeting the Global Food Demand of the Future by Engineering Crop Photosynthesis and Yield Potential
2015 Standout
Extraction of violacein from Chromobacterium violaceum provides a new quantitative bioassay for N-acyl homoserine lactone autoinducers
2000
Programmed population control by cell–cell communication and regulated killing
2004 StandoutNatureNobel
Signal Transduction by a Death Signal Peptide
2000 StandoutNobel
A "Neural" Enzyme in Nonbilaterian Animals and Algae: Preneural Origins for Peptidylglycine -Amidating Monooxygenase
2012
Bacterial N-acyl-homoserine-lactone-dependent signalling and its potential biotechnological applications
1997
Quorum-sensing in Gram-negative bacteria
2001 Standout
Quorum sensing inVibrio fischeri: elements of theluxIpromoter
1999
Urinary tract infections: epidemiology, mechanisms of infection and treatment options
2015 Standout
Structure of the Pseudomonas aeruginosa acyl‐homoserinelactone synthase LasI
2004
Identification and Analysis of Putative Homologues of Mechanosensitive Channels in Pathogenic Protozoa
2013
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
2017 Standout
A synthetic multicellular system for programmed pattern formation
2005 StandoutNatureNobel
Origins and diversity of eukaryotic CO2-concentrating mechanisms: lessons for the future
2013
The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
2013
The pros, cons, and many unknowns of probiotics
2019 Standout
Uniclust databases of clustered and deeply annotated protein sequences and alignments
2016
Acinetobacter baumannii : Emergence of a Successful Pathogen
2008 Standout
Gut Microbiota in Health and Disease
2010 Standout
Regulation of Gene Expression by Cell-to-Cell Communication: Acyl-Homoserine Lactone Quorum Sensing
2001 Standout
Analogs of the Autoinducer 3-Oxooctanoyl-Homoserine Lactone Strongly Inhibit Activity of the TraR Protein of Agrobacterium tumefaciens
1998
Vibrio fischeri lux Genes Play an Important Role in Colonization and Development of the Host Light Organ
2000
Synthesis of Extracellular Polysaccharide, Extracellular Enzymes, and Xanthomonadin in Xanthomonas campestris: Evidence for the Involvement of Two Intercellular Regulatory Signals
1998
Quorum sensing in Aeromonas hydrophila and Aeromonas salmonicida: identification of the LuxRI homologs AhyRI and AsaRI and their cognate N-acylhomoserine lactone signal molecules
1997
A second N-acylhomoserine lactone signal produced by Pseudomonas aeruginosa.
1995
Quorum sensing in Vibrio fischeri: evidence that S-adenosylmethionine is the amino acid substrate for autoinducer synthesis
1996
Avenolide, a Streptomyces hormone controlling antibiotic production in Streptomyces avermitilis
2011 StandoutNobel
Vfr controls quorum sensing in Pseudomonas aeruginosa
1997
Vibrio fischeri LuxS and AinS: Comparative Study of Two Signal Synthases
2004
Quorum regulation of luminescence in Vibrio fischeri.
1999
BiG-FAM: the biosynthetic gene cluster families database
2020
Implications of Rewiring Bacterial Quorum Sensing
2007 StandoutNobel
The LuxM Homologue VanM from Vibrio anguillarum Directs the Synthesis of N -(3-Hydroxyhexanoyl)homoserine Lactone and N -Hexanoylhomoserine Lactone
2001
CENSUS AND CONSENSUS IN BACTERIAL ECOSYSTEMS: The LuxR-LuxI Family of Quorum-Sensing Transcriptional Regulators
1996
Quorum Sensing in Bacteria
2001 Standout
Generation of cell-to-cell signals in quorum sensing: acyl homoserine lactone synthase activity of a purified Vibrio fischeri LuxI protein.
1996
The Vibrio fischeri luminescence gene activator LuxR is a membrane-associated protein
1993
The biocontrol strain Pseudomonas fluorescens F113 produces the Rhizobium small bacteriocin, N-(3-hydroxy-7-cis-tetradecenoyl)homoserine lactone, via HdtS, a putative novel N-acylhomoserine lactone synthase The GenBank accession number for the sequence determined in this work is AF286536.
2000
Autoinducer-mediated regulation of rhamnolipid biosurfactant synthesis in Pseudomonas aeruginosa.
1995
Bacterial Biofilms: A Common Cause of Persistent Infections
1999 StandoutScience
LESSONS FROM A COOPERATIVE, BACTERIAL-ANIMAL ASSOCIATION: The Vibrio fischeri–Euprymna scolopes Light Organ Symbiosis
1996
Roles of Pseudomonas aeruginosa las and rhl quorum-sensing systems in control of elastase and rhamnolipid biosynthesis genes
1997
Multiple N-acyl-L-homoserine lactone signal molecules regulate production of virulence determinants and secondary metabolites in Pseudomonas aeruginosa.
1995
Engineering microbial consortia: a new frontier in synthetic biology
2008 StandoutNobel
A squid that glows in the night: development of an animal-bacterial mutualism
1992
Quorum sensing in Vibrio anguillarum: characterization of the vanI/vanR locus and identification of the autoinducer N-(3-oxodecanoyl)-L-homoserine lactone
1997
Quorum sensing in Escherichia coli , Salmonella typhimurium , and Vibrio harveyi : A new family of genes responsible for autoinducer production
1999
Chaperone-Usher Fimbriae of <em>Escherichia coli</em>
2016
In Vivo Evidence that S -Adenosylmethionine and Fatty Acid Synthesis Intermediates Are the Substrates for the LuxI Family of Autoinducer Synthases
1998
A homoserine lactone autoinducer regulates virulence of an insect-pathogenic bacterium, Xenorhabdus nematophilus (Enterobacteriaceae)
1997
Acylhomoserine Lactone Synthase Activity of the Vibrio fischeri AinS Protein
1999
Purification, characterization and biological role of a pheromone produced byXanthomonas campestrispv.campestris
1997
Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa
1997
13C NMR study ofN-acyl-S-homoserine lactone derivatives
1999
Functional analysis of the Pseudomonas aeruginosa autoinducer PAI
1996
N-acyl-homoserine lactone-mediated regulation of phenazine gene expression by Pseudomonas aureofaciens 30-84 in the wheat rhizosphere
1997
Control of cell division in Escherichia coli: regulation of transcription of ftsQA involves both rpoS and SdiA-mediated autoinduction.
1996
Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides
2018
Synthesis of multiple exoproducts in Pseudomonas aeruginosa is under the control of RhlR-RhlI, another set of regulators in strain PAO1 with homology to the autoinducer-responsive LuxR-LuxI family
1995
The Danger Model: A Renewed Sense of Self
2002 StandoutScience
Production of Acyl-Homoserine Lactone Quorum-Sensing Signals by Gram-Negative Plant-Associated Bacteria
1998
Detection and quantification of Vibrio fischeri autoinducer from symbiotic squid light organs
1995
The Involvement of Cell-to-Cell Signals in the Development of a Bacterial Biofilm
1998 StandoutScience
luxI - and luxR -Homologous Genes of Rhizobium etli CNPAF512 Contribute to Synthesis of Autoinducer Molecules and Nodulation of Phaseolus vulgaris
1998
LuxR- and Acyl-Homoserine-Lactone-Controlled Non- lux Genes Define a Quorum-Sensing Regulon in Vibrio fischeri
2000
Directed Evolution ofVibrio fischeriLuxR for Improved Response to Butanoyl-Homoserine Lactone
2007 StandoutNobel
Capsular polysaccharide biosynthesis and pathogenicity in Erwinia stewartii require induction by an N-acylhomoserine lactone autoinducer
1995
Quorum Sensing but Not Autoinduction of Ti Plasmid Conjugal Transfer Requires Control by the Opine Regulon and the Antiactivator TraM
2000
Microbial evolution in extreme environments: microbial migration, genomic highways, and geochemical barriers in hydrothermal ecosystems
2015
Azithromycin Inhibits the Formation of Flagellar Filaments without Suppressing Flagellin Synthesis in Salmonella enterica Serovar Typhimurium
2005 StandoutNobel
Mycorrhizal ecology and evolution: the past, the present, and the future
2015 Standout
Quorum sensing in Vibrio fischeri: probing autoinducer-LuxR interactions with autoinducer analogs
1996
Quorum sensing and Chromobacterium violaceum: exploitation of violacein production and inhibition for the detection of N-acylhomoserine lactones
1997 Standout
Mutational analysis of the Vibrio fischeri LuxI polypeptide: critical regions of an autoinducer synthase
1997
Bacterial Quorum Sensing in Pathogenic Relationships
2000
Quorum sensing in bacteria: the LuxR-LuxI family of cell density-responsive transcriptional regulators
1994 Standout
Hierarchical autoinduction in Ralstonia solanacearum: control of acyl-homoserine lactone production by a novel autoregulatory system responsive to 3-hydroxypalmitic acid methyl ester
1997
REGULATORY CIRCUITRY CONTROLLING LUMINESCENCE AUTOINDUCTION IN Vibrio fischeri
1995
Messing with Bacterial Quorum Sensing
2006
Quorum sensing: a population-density component in the determination of bacterial phenotype
1996
Interchangeability and specificity of components from the quorum-sensing regulatory systems of Vibrio fischeri and Pseudomonas aeruginosa
1994
Regulatory Principles of Developmental Signaling
2002 StandoutNobel
Bacterial Quorum-Sensing Network Architectures
2009 Standout
Salmonella typhimurium Encodes an SdiA Homolog, a Putative Quorum Sensor of the LuxR Family, That Regulates Genes on the Virulence Plasmid
1998
Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium
2007 StandoutNobel
Third generation sequencing: technology and its potential impact on evolutionary biodiversity research
2015
Control of bioluminescence in Vibrio fischeri by the LuxO signal response regulator
2000
Detecting and characterizing N -acyl-homoserine lactone signal molecules by thin-layer chromatography
1997
De novo design of protein logic gates
2020 StandoutScienceNobel
Protein contact prediction using metagenome sequence data and residual neural networks
2019 StandoutNobel
Works of Alan Kuo being referenced
The Chlorella variabilis NC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex
2010
Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom
2021
Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants
2016
MycoCosm portal: gearing up for 1000 fungal genomes
2013
The Genome Portal of the Department of Energy Joint Genome Institute
2011
The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses
2014
Cell density-dependent modulation of the Vibrio fischeri luminescence system in the absence of autoinducer and LuxR protein
1992
Modulation of luminescence operon expression by N-octanoyl-L-homoserine lactone in ainS mutants of Vibrio fischeri
1996
Multiple N-acyl-L-homoserine lactone autoinducers of luminescence in the marine symbiotic bacterium Vibrio fischeri
1994
AinS and a new family of autoinducer synthesis proteins
1995